RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 TMED2Q15363 201 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 AGAP11Q8TF27 550 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 PIK3R5Q8WYR1 880 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 RPGRQ92834 1020 aaKnown RBP9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 VPS37BQ9H9H4 285 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 PFASO15067 1338 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 CHMP2AO43633 222 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 PON1P27169 355 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 PSEN1P49768 467 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 POLE2P56282 527 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 IFI35P80217 286 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 TRAF1Q13077 416 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 LONRF1Q17RB8 773 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ASTE1Q2TB18 679 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 CYP4F22Q6NT55 531 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 TPH2Q8IWU9 490 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 PCDHA1Q9Y5I3 950 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 POC1B-GALNT4F8VUJ3 575 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 O00370 1275 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 CIB2O75838 187 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 RARGP13631 454 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ALDH5A1P51649 535 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 MRPS35P82673 323 aaKnown RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 SPARCL1Q14515 664 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 UAP1Q16222 522 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 RASIP1Q5U651 963 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 NT5DC3Q86UY8 548 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 DNAAF5Q86Y56 855 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ZNF653Q96CK0 615 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 CEP95Q96GE4 821 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 SEMA4AQ9H3S1 761 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 PITPNM2Q9BZ72 1349 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 RASA4BC9J798 803 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 RASA4O43374 803 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 SLC37A4O43826 429 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 FTLP02792 175 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 DDB1Q16531 1140 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 FOXR2Q6PJQ5 311 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 EPM2AIP1Q7L775 607 aaPredicted RBP9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ANKRD27Q96NW4 1050 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ABCF3Q9NUQ8 709 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 ALG6Q9Y672 507 aa9.02□□□□□ -0.97
SMARCA2-246ENST00000635739 FLT1P17948 1338 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 POTEFA5A3E0 1075 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 ARHGEF35A5YM69 484 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SNX3O60493 162 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 FGRP09769 529 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 POTEIP0CG38 1075 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 FLT3P36888 993 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 KLC1Q07866 573 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 ACCSLQ4AC99 568 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 DPP8Q6V1X1 898 aaPredicted RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 MORC4Q8TE76 937 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 WNT8AQ9H1J5 351 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 UBE2TQ9NPD8 197 aaPredicted RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 LARSQ9P2J5 1176 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 MYH10P35580 1976 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 PPIP5K2O43314 1243 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 CYTH3O43739 400 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 NUDT17P0C025 328 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 KRT5P13647 590 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SIK1P57059 783 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 CAV1Q03135 178 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 TRIP13Q15645 432 aaPredicted RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.974e-6■■■■□ 24.4
SMARCA2-246ENST00000635739 CELF1Q92879 486 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 ZFATQ9P243 1243 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 EXOC1LA0A1B0GW35 172 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 DCDC2CA8MYV0 355 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 F8W031 263 aaPredicted RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SLC16A3O15427 465 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 TTLL1O95922 423 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 CA4P22748 312 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 RBM5P52756 815 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 RNF207Q6ZRF8 634 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 TRMT1LQ7Z2T5 733 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SCYL3Q8IZE3 742 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 PPM1KQ8N3J5 372 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SCFD1Q8WVM8 642 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 ZBTB10Q96DT7 871 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 CFAP57Q96MR6 1250 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 SERPINB12Q96P63 405 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 MMTAG2Q9BU76 263 aaKnown RBP9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 NEUROG2Q9H2A3 272 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
SMARCA2-246ENST00000635739 CDH16O75309 829 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms