RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TMCO2Q7Z6W1 182 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 RNF149Q8NC42 400 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 ASAP3Q8TDY4 903 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 LRRC15Q8TF66 581 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 SYMPKQ92797 1274 aaKnown RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 CALML4Q96GE6 196 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 CDK5RAP3Q96JB5 506 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 NLRP4Q96MN2 994 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 PBX4Q9BYU1 374 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 POLR3FQ9H1D9 316 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 BLOC1S4Q9NUP1 217 aa10.81□□□□□ -0.68
LINC00339-210ENST00000635675 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-210ENST00000635675 MGEA5O60502 916 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 GJB5O95377 273 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 PLA2G4BP0C869 781 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 PLCG1P19174 1290 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 RABGGTBP53611 331 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 TTC3P53804 2025 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 SLC12A3P55017 1021 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 PTENP60484 403 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 NUCB2P80303 420 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 CAPSQ13938 189 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 DSC3Q14574 896 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 AXDND1Q5T1B0 1012 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-210ENST00000635675 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 RINT1Q6NUQ1 792 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 IFNLR1Q8IU57 520 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-210ENST00000635675 SYT2Q8N9I0 419 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-210ENST00000635675 KCNG4Q8TDN1 519 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 TOP1MTQ969P6 601 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 RUSC1Q9BVN2 902 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 INO80BQ9C086 356 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-210ENST00000635675 MINDY3Q9H8M7 445 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 RGS18Q9NS28 235 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 PCDHA11Q9Y5I1 949 aa10.8□□□□□ -0.68
LINC00339-210ENST00000635675 GBF1Q92538 1859 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 CUTAO60888 179 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 MYOGP15173 224 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 FGFR4P22455 802 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 DNAJB2P25686 324 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 FAM189BP81408 668 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 TFDP1Q14186 410 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 RAB30Q15771 203 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 MYOCDQ8IZQ8 938 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 DAW1Q8N136 415 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 ADAM2Q99965 735 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 CCDC39Q9UFE4 941 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 PCDHA7Q9UN72 937 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 YBX2Q9Y2T7 364 aaKnown RBP10.79□□□□□ -0.68
LINC00339-210ENST00000635675 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
LINC00339-210ENST00000635675 A0A087X0B3 334 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 DENND3A2RUS2 1198 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 C9IYK1 514 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 SSBP05455 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC00339-210ENST00000635675 SFPQP23246 707 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC00339-210ENST00000635675 GUCY2CP25092 1073 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 PHKA2P46019 1235 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 HTRA4P83105 476 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-210ENST00000635675 MAPK7Q13164 816 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 PCBP1Q15365 356 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC00339-210ENST00000635675 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 FAM117BQ6P1L5 589 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 SHC4Q6S5L8 630 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 SLC24A5Q71RS6 500 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 RAD54LQ92698 747 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 KIFAP3Q92845 792 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 RAD9AQ99638 391 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 CHST12Q9NRB3 414 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 KCND2Q9NZV8 630 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 MSRAQ9UJ68 235 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 TCHHQ07283 1943 aa10.78□□□□□ -0.68
LINC00339-210ENST00000635675 TLL1O43897 1013 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 HIP1RO75146 1068 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 UPP2O95045 317 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 TXLNAP40222 546 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 NAMPTP43490 491 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 ME1P48163 572 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 SARSP49591 514 aaKnown RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 KRT85P78386 507 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 MBTD1Q05BQ5 628 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 MCM6Q14566 821 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 CDCA2Q69YH5 1023 aaPredicted RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 RASSF8Q8NHQ8 419 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 LEO1Q8WVC0 666 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms