RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 LARSQ9P2J5 1176 aaKnown RBP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 RSPH10B2B2RC85 870 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 CA12O43570 354 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 AFPP02771 609 aaKnown RBP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 NR3C1P04150 777 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 RSPH10BP0C881 870 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 PSEN1P49768 467 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 KLK7P49862 253 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 PSMC5P62195 406 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 NCBP1Q09161 790 aaKnown RBP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 ZNF720Q7Z2F6 126 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 VSIG10LQ86VR7 867 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 SULF1Q8IWU6 871 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 C4orf19Q8IY42 314 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 PDCL2Q8N4E4 241 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 IL31RAQ8NI17 732 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 WDR24Q96S15 920 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 MKNK1Q9BUB5 465 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 DEF6Q9H4E7 631 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 LUC7LQ9NQ29 371 aaKnown RBP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 FAM207AQ9NSI2 230 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-230ENST00000634433 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 LIMD1Q9UGP4 676 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 CSADQ9Y600 493 aa7.83□□□□□ -1.16
BRCA1-230ENST00000634433 EFCAB8A8MWE9 144 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 DDX39AO00148 427 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 NR3C2P08235 984 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PDGFRBP09619 1106 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 XRCC5P13010 732 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 IREB2P48200 963 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 CASP5P51878 434 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 HIRAP54198 1017 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SNRPFP62306 86 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 DGKZQ13574 1117 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 GNPTABQ3T906 1256 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PRAMEF18Q5VWM3 479 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PDXDC1Q6P996 788 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SLC30A10Q6XR72 485 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 RRAGAQ7L523 313 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 OTUD6AQ7L8S5 288 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 IWS1Q96ST2 819 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 NAPGQ99747 312 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 LSM14BQ9BX40 385 aaKnown RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 TMEM206Q9H813 350 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PPCSQ9HAB8 311 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 FBXO40Q9UH90 709 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 LOXHD1Q8IVV2 1947 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SSU72P8A0A1W2PR75 194 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 GRXCR2A6NFK2 248 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 NF2P35240 595 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 KIF5AQ12840 1032 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SLC9C1Q4G0N8 1177 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SFMBT2Q5VUG0 894 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 SMAP1Q8IYB5 467 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 CEP112Q8N8E3 955 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 GBP3Q9H0R5 595 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PLCB1Q9NQ66 1216 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 PKD2L1Q9P0L9 805 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 ZNF214Q9UL59 606 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-230ENST00000634433 MYO6Q9UM54 1294 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 DAAM1Q9Y4D1 1078 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 MRFAP1Q9Y605 127 aa7.82□□□□□ -1.16
BRCA1-230ENST00000634433 NFASCO94856 1347 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 GTPBP10A4D1E9 387 aaKnown RBP7.81□□□□□ -1.16
BRCA1-230ENST00000634433 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 HIP1RO75146 1068 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 SERPING1P05155 500 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 NMT1P30419 496 aaKnown RBP7.81□□□□□ -1.16
BRCA1-230ENST00000634433 HOXD13P35453 343 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 GNALP38405 381 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 ARHGAP25P42331 645 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 KCNMA1Q12791 1236 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 TMEM132BQ14DG7 1078 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 CCDC122Q5T0U0 273 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 GBP6Q6ZN66 633 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 SUGP1Q8IWZ8 645 aaKnown RBP7.81□□□□□ -1.16
BRCA1-230ENST00000634433 SYCP3Q8IZU3 236 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 SMCR8Q8TEV9 937 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-230ENST00000634433 JAKMIP2Q96AA8 810 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 ACCSQ96QU6 501 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 WRAP73Q9P2S5 460 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-230ENST00000634433 CDC23Q9UJX2 597 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 PCDHA10Q9Y5I2 948 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 ASTN1O14525 1302 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 LRRC53A6NM62 1247 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 ZBTB39O15060 712 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 AKR1B10O60218 316 aa7.81□□□□□ -1.16
BRCA1-230ENST00000634433 PLS3P13797 630 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms