RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 LLGL1Q15334 1064 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PIP4K2CQ8TBX8 421 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 TDRD3Q9H7E2 651 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 SCOCQ9UIL1 159 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 EIF4E1BA6NMX2 242 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 GUCA1CO95843 209 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ATP1A1P05023 1023 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HIST1H2AGP0C0S8 130 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HIST1H2ADP20671 130 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 COPS2P61201 443 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 R3HDM1Q15032 1099 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HIF1AQ16665 826 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF827Q17R98 1081 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HIST1H2AHQ96KK5 128 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HIST1H2AJQ99878 128 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 TSEN34Q9BSV6 310 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 DESI2Q9BSY9 194 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 H2AFJQ9BTM1 129 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 POLR3FQ9H1D9 316 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 FAM217BQ9NTX9 383 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 TBC1D22BQ9NU19 505 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 AIPL1Q9NZN9 384 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PCDHA6Q9UN73 950 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PCDHA8Q9Y5H6 950 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ZFYVE16Q7Z3T8 1539 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ADAMTS12P58397 1594 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HMGB3O15347 200 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PFKFB2O60825 505 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CELF2O95319 508 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 RALBP11234 206 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ARHGEF25Q86VW2 580 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PAWRQ96IZ0 340 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF668Q96K58 619 aaPredicted RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 TUBB6Q9BUF5 446 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ZC4H2Q9NQZ6 224 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 DNAJC17Q9NVM6 304 aaKnown RBP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 SLC25A13Q9UJS0 675 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ARAP3Q8WWN8 1544 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ABCC4O15439 1325 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CALB1P05937 261 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 HMBSP08397 361 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ACADMP11310 421 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CDK17Q00537 523 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 MAN2A1Q16706 1144 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 IER5Q5VY09 327 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PASD1Q8IV76 773 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PDIK1LQ8N165 341 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 RAPGEF5Q92565 580 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 OSBPL10Q9BXB5 764 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CYP26B1Q9NR63 512 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 KCNA2P16389 499 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 SDC4P31431 198 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CLCN1P35523 988 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 AARSP49588 968 aaKnown RBP eCLIP6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 PLTPP55058 493 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 NCALDP61601 193 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CRLF3Q8IUI8 442 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 FBXL5Q9UKA1 691 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 ARHGAP26Q9UNA1 814 aa6.84□□□□□ -1.31
SRGAP1-207ENST00000631006 CHL1O00533 1208 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 CYP2B6P20813 491 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 KRT76Q01546 638 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 AP3B2Q13367 1082 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 RASEFQ8IZ41 740 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 KIAA1468Q9P260 1216 aa6.84□□□□□ -1.32
SRGAP1-207ENST00000631006 E9PMD0 336 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 KCNQ3O43525 872 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 IFNAR2P48551 515 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 HPCAP84074 193 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 SPP2Q13103 211 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 TJAP1Q5JTD0 557 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 RNF180Q86T96 592 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 TTC39CQ8N584 583 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 PPP1R14AQ96A00 147 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 ZNF512Q96ME7 567 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 FAM213AQ9BRX8 229 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 RNF26Q9BY78 433 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 FOXP1Q9H334 677 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 UNC45AQ9H3U1 944 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 A0A0D9SFI3 127 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 ZW10O43264 779 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 CDC42EP1Q00587 391 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 HES6Q96HZ4 224 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 RPAP3Q9H6T3 665 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 CAPN10Q9HC96 672 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 KRT8P05787 483 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 GSNP06396 782 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 SFNP31947 248 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 PSMC1P62191 440 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 ME3Q16798 604 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 DDIASQ8IXT1 998 aa6.83□□□□□ -1.32
SRGAP1-207ENST00000631006 ANKRD13CQ8N6S4 541 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms