RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 PARD6BQ9BYG5 372 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TRIM8Q9BZR9 551 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MIS12Q9H081 205 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 PAPOLBQ9NRJ5 636 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 EXOC1Q9NV70 894 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TMOD4Q9NZQ9 345 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 WWC3Q9ULE0 1092 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CORO1CQ9ULV4 474 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TTF2Q9UNY4 1162 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SATB2Q9UPW6 733 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF148Q9UQR1 794 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MTMR7Q9Y216 660 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LUC7L2Q9Y383 392 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 RPS6KL1Q9Y6S9 549 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SUPT6HQ7KZ85 1726 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GCC2Q8IWJ2 1684 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 EHBP1L1Q8N3D4 1523 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM135AQ9P2D6 1515 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 KDM5BQ9UGL1 1544 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TEX14Q8IWB6 1497 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RTEL1-TNFRSF6BF6WH68 1400 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 UHRF1BP1Q6BDS2 1440 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SSH2Q76I76 1423 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 KDRP35968 1356 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ABCC11Q96J66 1382 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RPAP1Q9BWH6 1393 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF521Q96K83 1311 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SYNRGQ9UMZ2 1314 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CFAP73A6NFT4 308 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MROH6A6NGR9 719 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SRRM3A6NNA2 597 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ENO4A6NNW6 628 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 LRRIQ3A6PVS8 624 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 F6X3S4 739 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 H3BQV1 296 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 EXOC5O00471 708 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MAP2K7O14733 419 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MUSKO15146 869 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 EIF3HO15372 352 aaKnown RBP eCLIP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ARHGAP6O43182 974 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 LAMTOR5O43504 91 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 NARSO43776 548 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 WDHD1O75717 1129 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF189O75820 626 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 FLOT1O75955 427 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 UBOX5O94941 541 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SEC31AO94979 1220 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 F13A1P00488 732 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CYBBP04839 570 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 C8BP07358 591 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 VIMP08670 466 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RPSAP08865 295 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GSTA2P09210 222 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 VIL1P09327 827 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TOP1P11387 765 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 NCAM1P13591 858 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ATP5JP18859 108 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 IBSPP21815 317 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PAX3P23760 479 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 POLR2BP30876 1174 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PCK1P35558 622 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 AMPHP49418 695 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 AARSP49588 968 aaKnown RBP eCLIP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SELENOPP49908 381 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RAB27AP51159 221 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GNGT1P63211 74 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MRPS25P82663 173 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PDE4BQ07343 736 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ACTN3Q08043 901 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CUL4AQ13619 759 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 DSC3Q14574 896 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RASA3Q14644 834 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CASP8Q14790 479 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SEPT7Q16181 437 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ALDH1L2Q3SY69 923 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 Q4G0T1 1027 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC93Q567U6 631 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RTP2Q5QGT7 225 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 C1QTNF12Q5T7M4 302 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TTC22Q5TAA0 569 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ALS2CLQ60I27 953 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PAQR3Q6TCH7 311 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CWC27Q6UX04 472 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CRELD2Q6UXH1 353 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PHLDB2Q86SQ0 1253 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SESTD1Q86VW0 696 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PPFIBP1Q86W92 1011 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SCUBE1Q8IWY4 988 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MYOCDQ8IZQ8 938 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CACNA2D3Q8IZS8 1091 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM177A1Q8N128 213 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 LGI4Q8N135 537 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 AFAP1Q8N556 730 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZGPATQ8N5A5 531 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SAMD3Q8N6K7 520 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 PDILTQ8N807 584 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MAB21L3Q8N8X9 362 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ATP11CQ8NB49 1132 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 LSM14AQ8ND56 463 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms