RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TSGA10Q9BZW7 698 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 POLR3FQ9H1D9 316 aaPredicted RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 TAS2R14Q9NYV8 317 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 HSPBP1Q9NZL4 362 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 GOLGA6L10A6NI86 522 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 RASSF10A6NK89 507 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 EIF3CLB5ME19 914 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 GOLGA8SH3BPF8 625 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 IRF6O14896 467 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 GJB6O95452 261 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 FGGP02679 453 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 FTLP02792 175 aaPredicted RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 BCRP11274 1271 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CCND2P30279 289 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 FMO5P49326 533 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 TREML2Q5T2D2 321 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 SH2D3CQ8N5H7 860 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 XXYLT1Q8NBI6 393 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 OR2W6PQ8NHA6 318 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CPA5Q8WXQ8 436 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 EIF3CQ99613 913 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 DNAJC7Q99615 494 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 INTS2Q9H0H0 1204 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 JPH1Q9HDC5 661 aaPredicted RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 JRKLQ9Y4A0 524 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 UBR2Q8IWV8 1755 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 PITPNM2Q9BZ72 1349 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 GOLGA6BA6NDN3 693 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 WDR46O15213 610 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 GGPS1O95749 300 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CTNNA2P26232 953 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CNGA1P29973 690 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 NUMBP49757 651 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 GALCP54803 685 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 PRKCEQ02156 737 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 KCTD2Q14681 263 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 PGM5Q15124 567 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 SUPT20HL1Q3ZLR7 823 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 WDR44Q5JSH3 913 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 ZNF720Q7Z2F6 126 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CCDC170Q8IYT3 715 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 SPATA4Q8NEY3 305 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 ZNF653Q96CK0 615 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 ACCSQ96QU6 501 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 ERGIC2Q96RQ1 377 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 AJAP1Q9UKB5 411 aaPredicted RBP8.14□□□□□ -1.11
PKP4-217ENST00000628904 PPP1R9AQ9ULJ8 1098 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CACNA1SQ13698 1873 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 BTAF1O14981 1849 aa8.14□□□□□ -1.11
PKP4-217ENST00000628904 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 ANKRD63C9JTQ0 380 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TLR2O60603 784 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 IFNB1P01574 187 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 MYBL2P10244 700 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 PIK3CAP42336 1068 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 CLK2P49760 499 aaKnown RBP8.13□□□□□ -1.11
PKP4-217ENST00000628904 RARRES1P49788 294 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 USP14P54578 494 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 DYNLT1P63172 113 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 KLHDC7AQ5VTJ3 777 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 GSTA5Q7RTV2 222 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 PALB2Q86YC2 1186 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TRIM59Q8IWR1 403 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 FBXO16Q8IX29 292 aaPredicted RBP8.13□□□□□ -1.11
PKP4-217ENST00000628904 SELENOOQ9BVL4 669 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TEX13BQ9BXU2 312 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 A1CFQ9NQ94 594 aaKnown RBP8.13□□□□□ -1.11
PKP4-217ENST00000628904 AKT3Q9Y243 479 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 SIK3Q9Y2K2 1263 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 IVNS1ABPQ9Y6Y0 642 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TUBGCP6Q96RT7 1819 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 PSMD10O75832 226 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 CYP3A4P08684 503 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 ATF7P17544 494 aaPredicted RBP8.13□□□□□ -1.11
PKP4-217ENST00000628904 PTPRAP18433 802 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 KCNJ1P48048 391 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TMEM132BQ14DG7 1078 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 CFAP58Q5T655 872 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TMEM270Q6UE05 265 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 CCDC105Q8IYK2 499 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 RNF149Q8NC42 400 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 ATP6V0A1Q93050 837 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TSPYL1Q9H0U9 437 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 THAP2Q9H0W7 228 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 SLC9A2Q9UBY0 812 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 VAV3Q9UKW4 847 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 SHANK3Q9BYB0 1731 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 SYNJ2BP-COX16A0A087WUM0 186 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 PDXKO00764 312 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 TGFB1I1O43294 461 aa8.13□□□□□ -1.11
PKP4-217ENST00000628904 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
PKP4-217ENST00000628904 HSF2BPO75031 334 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms