RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	STRN3	Q13033	797 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	TBR1	Q16650	682 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	FSCN1	Q16658	493 aa	Known RBP	4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	GJC2	Q5T442	439 aa	Predicted RBP	4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	UNQ6494/PRO21346	Q6UXR6	183 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	STRA8	Q7Z7C7	330 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	ADGRE4P	Q86SQ3	457 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	CLEC14A	Q86T13	490 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	CXorf67	Q86X51	503 aa	Predicted RBP	4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	SLC41A1	Q8IVJ1	513 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	PLA2G15	Q8NCC3	412 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	EDA	Q92838	391 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	ORAI2	Q96SN7	254 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	NOL10	Q9BSC4	688 aa	Known RBP	4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	CD248	Q9HCU0	757 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	SMPD4	Q9NXE4	827 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	TMPRSS11E	Q9UL52	423 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	PCDHB6	Q9Y5E3	794 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857	PHLDB1	Q86UU1	1377 aa		4.26	□□□□□ -1.73
CNOT1-223	ENST00000628857		A0A0A6YYK5	440 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	PRSS38	A1L453	326 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	C2orf78	A6NCI8	922 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	GPR39	O43194	453 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	ZNF623	O75123	536 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	JUN	P05412	331 aa	Known RBP	4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	ADRB1	P08588	477 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	STAT4	Q14765	748 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	HS1BP3	Q53T59	392 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	TCTN3	Q6NUS6	607 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	LIMS2	Q7Z4I7	341 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	POLN	Q7Z5Q5	900 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	TAX1BP1	Q86VP1	789 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	UNC5B	Q8IZJ1	945 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	WDR66	Q8TBY9	1149 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	GCDH	Q92947	438 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	DVL3	Q92997	716 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	FERMT2	Q96AC1	680 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	BORCS6	Q96GS4	357 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	MPHOSPH9	Q99550	1183 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	SOX7	Q9BT81	388 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	MENT	Q9BUN1	341 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	BRINP2	Q9C0B6	783 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	C14orf93	Q9H972	538 aa	Known RBP	4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	MCM8	Q9UJA3	840 aa		4.25	□□□□□ -1.73
CNOT1-223	ENST00000628857	KDM1A	O60341	852 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	VSIG10L2	P0DP72	767 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	POU3F3	P20264	500 aa	Predicted RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	XPA	P23025	273 aa	Predicted RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	KIR2DL3	P43628	341 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	RRAD	P55042	308 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	NRG3	P56975	720 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	ADAM8	P78325	824 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	MEF2A	Q02078	507 aa	Predicted RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	ADAM15	Q13444	863 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	ANO4	Q32M45	955 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	ZBTB41	Q5SVQ8	909 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	NECAB2	Q7Z6G3	386 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	SPATS2	Q86XZ4	545 aa	Known RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	LYSMD2	Q8IV50	215 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	UBR7	Q8N806	425 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	CLRN3	Q8NCR9	226 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	CHST13	Q8NET6	341 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	OR14C36	Q8NHC7	312 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857		Q8TCH9	128 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	LMBR1	Q8WVP7	490 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	GAB3	Q8WWW8	586 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	RAX2	Q96IS3	184 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	LOXL4	Q96JB6	756 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	PTPN18	Q99952	460 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	KIAA1683	Q9H0B3	1180 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	PUS7L	Q9H0K6	701 aa	Known RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	PRSS50	Q9UI38	385 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	FAM184B	Q9ULE4	1060 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	ZFR2	Q9UPR6	939 aa	Known RBP	4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	JAG2	Q9Y219	1238 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	PPP2R3B	Q9Y5P8	575 aa		4.24	□□□□□ -1.73
CNOT1-223	ENST00000628857	FOXS1	O43638	330 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	CDC14B	O60729	498 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	APOL3	O95236	402 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	GAA	P10253	952 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	MTHFD2	P13995	350 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	COMT	P21964	271 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	ENPP1	P22413	925 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	CNGA1	P29973	690 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	ID4	P47928	161 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	SELENOP	P49908	381 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	WNT3A	P56704	352 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	ADAM17	P78536	824 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	MRPS9	P82933	396 aa	Known RBP	4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	ICAM4	Q14773	271 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	PDCD1	Q15116	288 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	C19orf54	Q5BKX5	351 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	TAS1R1	Q7RTX1	841 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	SHCBP1	Q8NEM2	672 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	FAM89A	Q96GI7	184 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	WWC2-AS2	Q96NR7	200 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	LRRC37B	Q96QE4	947 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms