RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 ZIC5Q96T25 663 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 BAG1Q99933 345 aaPredicted RBP6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 TINF2Q9BSI4 451 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 TTYH3Q9C0H2 523 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 KCND1Q9NSA2 647 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 ARMCX3Q9UH62 379 aaPredicted RBP6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 FAM184BQ9ULE4 1060 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 ABT1Q9ULW3 272 aaKnown RBP6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 CAPN11Q9UMQ6 739 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 SIK3Q9Y2K2 1263 aa6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPS1-IT1-201ENST00000628368 EMSYQ7Z589 1322 aa6.4□□□□□ -1.39
CPS1-IT1-201ENST00000628368 DOCK3Q8IZD9 2030 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 CCDC169A6NNP5 214 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TPM1P09493 284 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 FECHP22830 423 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PSMC2P35998 433 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ARL2P36404 184 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 RFC5P40937 340 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TM4SF4P48230 202 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SREBF2Q12772 1141 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KCNMA1Q12791 1236 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KCNH2Q12809 1159 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MAP2K5Q13163 448 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ACVR2BQ13705 512 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MYBPC2Q14324 1141 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PLCB4Q15147 1175 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 FIGNQ5HY92 759 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 GJC2Q5T442 439 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 RETREG2Q8NC44 543 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 USP6NLQ92738 828 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 EMID1Q96A84 441 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 HHIPL1Q96JK4 782 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PKNOX2Q96KN3 472 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 FAM167AQ96KS9 214 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KIFC3Q9BVG8 833 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 NUP58Q9BVL2 599 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 POLR3FQ9H1D9 316 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ABHD16BQ9H3Z7 469 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ZFYVE28Q9HCC9 887 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 METTL14Q9HCE5 456 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KMT5AQ9NQR1 393 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ABHD10Q9NUJ1 306 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SLC5A4Q9NY91 659 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 CGNQ9P2M7 1197 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TBX20Q9UMR3 447 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ADGRA3Q8IWK6 1321 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 DENND3A2RUS2 1198 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 USP27XA6NNY8 438 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TISP43B9A030 160 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ARHGAP6O43182 974 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MAFO75444 373 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 GH1P01241 217 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 EPB41P11171 864 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TRIM21P19474 475 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MARK3P27448 753 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KRT9P35527 623 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SLC26A2P50443 739 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 CYP2J2P51589 502 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SNRPFP62306 86 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PPP2R3AQ06190 1150 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 CRHR2Q13324 411 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MAP4K3Q8IVH8 894 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 FAM186BQ8IYM0 893 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 CCAR2Q8N163 923 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MSL3Q8N5Y2 521 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ATP8B4Q8TF62 1192 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SLC7A3Q8WY07 619 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TMEM143Q96AN5 459 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 HVCN1Q96D96 273 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 IFT74Q96LB3 600 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 MKNK1Q9BUB5 465 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SMARCAD1Q9H4L7 1026 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 LUC7L2Q9Y383 392 aaKnown RBP6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PPME1Q9Y570 386 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PCNTO95613 3336 aa6.39□□□□□ -1.39
CPS1-IT1-201ENST00000628368 A0A1W2PQJ5 194 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 EPHB6O15197 1021 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 HOXC6P09630 235 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 XRCC5P13010 732 aaKnown RBP6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SMPD1P17405 629 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 GLRA2P23416 452 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 DUSP28Q4G0W2 176 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 IQSEC1Q6DN90 963 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 TAS1R3Q7RTX0 852 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 C12orf56Q8IXR9 622 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 OR8K1Q8NGG5 319 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 PPTC7Q8NI37 304 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 ASAP3Q8TDY4 903 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 AFG1LQ8WV93 481 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 KCNN1Q92952 543 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 SLC35C1Q96A29 364 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 IQCDQ96DY2 449 aa6.38□□□□□ -1.39
CPS1-IT1-201ENST00000628368 DNAJC7Q99615 494 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms