RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 SYPP08247 313 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 HOXB7P09629 217 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 TXNP10599 105 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FSHRP23945 695 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RBMXP38159 391 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 EPHA5P54756 1037 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PCBP4P57723 403 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 USP39Q53GS9 565 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SLC23A3Q6PIS1 610 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 C1orf228Q6PIY5 440 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 KSR2Q6VAB6 950 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 TMPRSS12Q86WS5 348 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SYT12Q8IV01 421 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 VPS52Q8N1B4 723 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CAMKK1Q8N5S9 505 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CEP76Q8TAP6 659 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SCFD2Q8WU76 684 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 TGFBRAP1Q8WUH2 860 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 BCL7CQ8WUZ0 217 aaPredicted RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SNRNP27Q8WVK2 155 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 KCNE4Q8WWG9 221 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 KAT2BQ92831 832 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 TMEM169Q96HH4 297 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CFAP53Q96M91 514 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FAM20AQ96MK3 541 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CDC6Q99741 560 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SEMA3CQ99985 751 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 KXD1Q9BQD3 176 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RHOBTB2Q9BYZ6 727 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PUS3Q9BZE2 481 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 NRSN2Q9GZP1 204 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 EPN3Q9H201 632 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ACAD9Q9H845 621 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 VCPKMTQ9H867 229 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PRDM16Q9HAZ2 1276 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 HOMER2Q9NSB8 354 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FBXO28Q9NVF7 368 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CUEDC1Q9NWM3 386 aaPredicted RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ADD3Q9UEY8 706 aaKnown RBP3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PIAS3Q9Y6X2 628 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CENPEQ02224 2701 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 UBE4BO95155 1302 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PATJQ8NI35 1801 aa3.65□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 EXTL3O43909 919 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RECQL4O94761 1208 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ATXN1LP0C7T5 689 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 GNAT1P11488 350 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CCNE1P24864 410 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CSTF2P33240 577 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 EMP3P54852 163 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SKOR1P84550 965 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PUM3Q15397 648 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SMAD1Q15797 465 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 DUOXA1Q1HG43 343 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SKIDA1Q1XH10 827 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PMS2CLQ68D20 193 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 Q6ZS52 159 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CHST3Q7LGC8 479 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RSPH3Q86UC2 560 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SYNPOQ8N3V7 929 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 REPS2Q8NFH8 660 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ENGASEQ8NFI3 743 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 COPS5Q92905 334 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 IRF7Q92985 503 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 KAZALD1Q96I82 304 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SIN3AQ96ST3 1273 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SLF1Q9BQI6 1058 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 AMNQ9BXJ7 453 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 OSBPL7Q9BZF2 842 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RAVER2Q9HCJ3 691 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 MAN1C1Q9NR34 630 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RBM12Q9NTZ6 932 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SAP30BPQ9UHR5 308 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 SERPINB13Q9UIV8 391 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 IRAK3Q9Y616 596 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 WNT6Q9Y6F9 365 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 DDX49Q9Y6V7 483 aaKnown RBP3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ZMYM6O95789 1325 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ATG2AQ2TAZ0 1938 aa3.64□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FLNAP21333 2647 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 LRBAP50851 2863 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ARHGEF17Q96PE2 2063 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 FNDC1Q4ZHG4 1894 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 RBM47A0AV96 593 aaKnown RBP3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 PI4KAP2A4QPH2 592 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ZNF316A6NFI3 1004 aaPredicted RBP3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 TMEM200CA6NKL6 621 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 B4DLN1 442 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 K7ENP7 123 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ATP2A1O14983 1001 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 BRINP1O60477 761 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 GH1P01241 217 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CTSAP10619 480 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CD99P14209 185 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 ITGB6P18564 788 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 HOXC13P31276 330 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CASRP41180 1078 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 CLCN4P51793 760 aa3.63□□□□□ -1.83
SCARNA15.3-201ENST00000626315 MRPL12P52815 198 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms