RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MORC2Q9Y6X9 1032 aaPredicted RBP14.11□□□□□ -0.15
PNKP-217ENST00000625216 MGEA5O60502 916 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 PPP6R2O75170 966 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 MBD3O95983 291 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 ZSCAN20P17040 1043 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 MCM7P33993 719 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 ME1P48163 572 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 ATP2C1P98194 919 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 DSC3Q14574 896 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 ANO5Q75V66 913 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 P2RX5Q93086 422 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 PPP1R16BQ96T49 567 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 GCOM2Q9BZD3 368 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 TMEM161AQ9NX61 479 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 FBXO2Q9UK22 296 aaPredicted RBP14.1□□□□□ -0.15
PNKP-217ENST00000625216 PCDHA12Q9UN75 941 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 TTC28Q96AY4 2481 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 TTC3P53804 2025 aa14.1□□□□□ -0.15
PNKP-217ENST00000625216 BMP15O95972 392 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 BMP1P13497 986 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 LIG1P18858 919 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 GRIN1Q05586 938 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 CALCRLQ16602 461 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 SKOR2Q2VWA4 1001 aaPredicted RBP14.09□□□□□ -0.15
PNKP-217ENST00000625216 ZNF410Q86VK4 478 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 C4orf32Q8N8J7 132 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 SLC7A3Q8WY07 619 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 GOLPH3LQ9H4A5 285 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 ZSWIM4Q9H7M6 989 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 CYP26B1Q9NR63 512 aa14.09□□□□□ -0.15
PNKP-217ENST00000625216 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
PNKP-217ENST00000625216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.08□□□□□ -0.16
PNKP-217ENST00000625216 HOXA2O43364 376 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 NCK2O43639 380 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 GAS2O43903 313 aaKnown RBP14.08□□□□□ -0.16
PNKP-217ENST00000625216 RFC5P40937 340 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 TFF2Q03403 129 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 NCAPH2Q6IBW4 605 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 CEP170P1Q96L14 293 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 CLIC6Q96NY7 704 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 LXNQ9BS40 222 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 TMEM60Q9H2L4 133 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 NSUN3Q9H649 340 aaKnown RBP14.08□□□□□ -0.16
PNKP-217ENST00000625216 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
PNKP-217ENST00000625216 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
PNKP-217ENST00000625216 SPTBN5Q9NRC6 3674 aaKnown RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 NEMFO60524 1076 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 CUTAO60888 179 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 SLITRK3O94933 977 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 LYPLA2O95372 231 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 EOMESO95936 686 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 YWHABP31946 246 aaKnown RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 PTGDRQ13258 359 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 DRP2Q13474 957 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 ADALQ6DHV7 355 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 SHC4Q6S5L8 630 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 MTMR9Q96QG7 549 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 HSD17B14Q9BPX1 270 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 UBE2ZQ9H832 354 aaPredicted RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 TTC12Q9H892 705 aaPredicted RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 DACT1Q9NYF0 836 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 RGL1Q9NZL6 768 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
PNKP-217ENST00000625216 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
PNKP-217ENST00000625216 SIP14410 1827 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 A0A087WZ62 844 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 A0A0U1RQF3 1178 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 TBKBP1A7MCY6 615 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 GRM6O15303 877 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 ASAP2O43150 1006 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.16
PNKP-217ENST00000625216 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
PNKP-217ENST00000625216 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
PNKP-217ENST00000625216 NPEPPSP55786 919 aa14.06□□□□□ -0.16
PNKP-217ENST00000625216 PAN2Q504Q3 1202 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms