RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 JAG1P78504 1218 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 PPATQ06203 517 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 BIRC3Q13489 604 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 MTMR3Q13615 1198 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 TMEM179Q6ZVK1 233 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
LINC00552-201ENST00000625151 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 ARHGEF26Q96DR7 871 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 FIZ1Q96SL8 496 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 TRIM31Q9BZY9 425 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 TAS2R14Q9NYV8 317 aa16.51■□□□□ 0.23
LINC00552-201ENST00000625151 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
LINC00552-201ENST00000625151 SRRM3A6NNA2 597 aaPredicted RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 G3V3G9 751 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 CYP3A4P08684 503 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 TMEM253P0C7T8 217 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 HNRNPH1P31943 449 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 COPB2P35606 906 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 MICALCLQ6ZW33 695 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 ADAT2Q7Z6V5 191 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 PALB2Q86YC2 1186 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 CNPY4Q8N129 248 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 ATP8B4Q8TF62 1192 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 TTC7AQ9ULT0 858 aaPredicted RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 UTP11Q9Y3A2 253 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 SCN9AQ15858 1988 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 FSBPO95073 299 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 CYP2J2P51589 502 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 ABCB5Q2M3G0 1257 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 YTHDF3Q7Z739 585 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 CYFIP2Q96F07 1278 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
LINC00552-201ENST00000625151 NOVA2Q9UNW9 492 aaKnown RBP16.5■□□□□ 0.23
LINC00552-201ENST00000625151 BMP3P12645 472 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 RBM5P52756 815 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 PRPF4BQ13523 1007 aaKnown RBP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 PLS1Q14651 629 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 NFIL3Q16649 462 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 CTNNBL1Q8WYA6 563 aaPredicted RBP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 THAP2Q9H0W7 228 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 ERVK-5Q9HDB9 667 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 FAM114A2Q9NRY5 505 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 PPP2R2AP63151 447 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 IFT88Q13099 833 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 ODF2Q5BJF6 829 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 MKNK1Q9BUB5 465 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
LINC00552-201ENST00000625151 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 COG5Q9UP83 839 aa16.49■□□□□ 0.23
LINC00552-201ENST00000625151 CLGNO14967 610 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 PSMD10O75832 226 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 PTENP60484 403 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 RNF187Q5TA31 235 aaPredicted RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 C6orf89Q6UWU4 347 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 ZNF720Q7Z2F6 126 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 AGPAT3Q9NRZ7 376 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 SEPT11Q9NVA2 429 aaKnown RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 APEX2Q9UBZ4 518 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 PRR12Q9ULL5 1215 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 GMNCA6NCL1 334 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 MAGOHP61326 146 aaKnown RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 QPCTQ16769 361 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 MAGOHBQ96A72 148 aaKnown RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 GEMIN8Q9NWZ8 242 aaKnown RBP16.48■□□□□ 0.23
LINC00552-201ENST00000625151 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
LINC00552-201ENST00000625151 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 BACH1O14867 736 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 LRRN2O75325 713 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 GH2P01242 217 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 UBXN2AP68543 259 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
LINC00552-201ENST00000625151 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 BANK1Q8NDB2 785 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 ALG3Q92685 438 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 FMO2Q99518 471 aa16.47■□□□□ 0.23
LINC00552-201ENST00000625151 TXLNGYQ9BZA5 131 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms