RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 HSPA2P54652 639 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 RPS8P62241 208 aaKnown RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 CAV1Q03135 178 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 PTGDRQ13258 359 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 IDI1Q13907 227 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 VEPH1Q14D04 833 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 PHKG1Q16816 387 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 NAALADL2Q58DX5 795 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 ARHGAP17Q68EM7 881 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 EPM2AIP1Q7L775 607 aaPredicted RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 DDX53Q86TM3 631 aaKnown RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 CDR2LQ86X02 465 aaPredicted RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 IFNL3Q8IZI9 196 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 CCDC24Q8N4L8 307 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 SCFD1Q8WVM8 642 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 ASZ1Q8WWH4 475 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 THAP11Q96EK4 314 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 HIST1H2AHQ96KK5 128 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 HIST1H2AJQ99878 128 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 SPATA16Q9BXB7 569 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 C14orf93Q9H972 538 aaKnown RBP4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 EHD2Q9NZN4 543 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 PNMA3Q9UL41 463 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 STAP1Q9ULZ2 295 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 AURKCQ9UQB9 309 aa4.3□□□□□ -1.72
ANKRD28-215ENST00000624145 ZFYVE9O95405 1425 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 MYO1GB0I1T2 1018 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CYBBP04839 570 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ZNF235Q14590 738 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 LLGL1Q15334 1064 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 DOK7Q18PE1 504 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 C8orf34Q49A92 452 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 USP39Q53GS9 565 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FLCNQ8NFG4 579 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 VPS50Q96JG6 964 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CALR3Q96L12 384 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ELAC2Q9BQ52 826 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 KRCC1Q9NPI7 259 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PAIP2BQ9ULR5 123 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 IKBKBO14920 756 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 BIRC5O15392 142 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 MAP3K13O43283 966 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FMNL1O95466 1100 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 IREB2P48200 963 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ST8SIA6P61647 398 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 TRADDQ15628 312 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 INAQ16352 499 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ADCK5Q3MIX3 580 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PDXDC2PQ6P474 469 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PGBD3Q8N328 593 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 RFWD2Q8NHY2 731 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 DIS3LQ8TF46 1054 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PRDM5Q9NQX1 630 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ZC3H7BQ9UGR2 993 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ZBTB12Q9Y330 459 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SRPRBQ9Y5M8 271 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SYNGAP1Q96PV0 1343 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 TRPM2O94759 1503 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ZMYND10O75800 440 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 TTLL1O95922 423 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CALB1P05937 261 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 PPP3CCP48454 512 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CTSWP56202 376 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FKBP3Q00688 224 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 KRT17Q04695 432 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 NFX1Q12986 1120 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 BFSP2Q13515 415 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 NBPF9Q3BBW0 867 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 HEATR6Q6AI08 1181 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 APOA5Q6Q788 366 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CDKL3Q8IVW4 592 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 BEST2Q8NFU1 509 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 EXD1Q8NHP7 514 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 THOC1Q96FV9 657 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 FAM49AQ9H0Q0 323 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 EXOSC4Q9NPD3 245 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 TBC1D23Q9NUY8 699 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 BABAM1Q9NWV8 329 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 POTEFA5A3E0 1075 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SEMA3EO15041 775 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CYTH3O43739 400 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 RALAP11233 206 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CDC25BP30305 580 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CHRNA3P32297 505 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ARFIP2P53365 341 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 CUL3Q13618 768 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 SHROOM1Q2M3G4 852 aaPredicted RBP4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 EFHC2Q5JST6 749 aa4.29□□□□□ -1.72
ANKRD28-215ENST00000624145 ANKS6Q68DC2 871 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms