RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
LINC00963-214ENST00000622680 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-214ENST00000622680 CACNA1IQ9P0X4 2223 aa12.37□□□□□ -0.43
LINC00963-214ENST00000622680 PATJQ8NI35 1801 aa12.37□□□□□ -0.43
LINC00963-214ENST00000622680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 GAS7O60861 476 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 CLASP2O75122 1294 aaKnown RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 ZC3H11AO75152 810 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 BRD1O95696 1058 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 DARSP14868 501 aaKnown RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 TMOD1P28289 359 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 AVPR2P30518 371 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 CIITAP33076 1130 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 KRT17Q04695 432 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 KRT32Q14532 448 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 MTERF2Q49AM1 385 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 RARS2Q5T160 578 aaKnown RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 C12orf76Q8N812 135 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 CASP10Q92851 521 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 PRRX2Q99811 253 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 SEPT9Q9UHD8 586 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-214ENST00000622680 MYH11P35749 1972 aa12.36□□□□□ -0.43
LINC00963-214ENST00000622680 A0A0U1RQF3 1178 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 MEIS3P2A8K0S8 358 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 H0Y858 1186 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
LINC00963-214ENST00000622680 B4GALT3O60512 393 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 GFRA3O60609 400 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 CDC45O75419 566 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 ASGR2P07307 311 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 EPCAMP16422 314 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 GNA11P29992 359 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 BCAR1P56945 870 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 NTRK3Q16288 839 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 MRPL43Q8N983 215 aaKnown RBP12.35□□□□□ -0.43
LINC00963-214ENST00000622680 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
LINC00963-214ENST00000622680 SLC5A5Q92911 643 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 RIPOR3Q96MK2 946 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
LINC00963-214ENST00000622680 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
LINC00963-214ENST00000622680 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 SORCS3Q9UPU3 1222 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 CITO14578 2027 aa12.35□□□□□ -0.43
LINC00963-214ENST00000622680 A0A087WZ62 844 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 TDP2O95551 362 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 PHKA2P46019 1235 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 CCT2P78371 535 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 MCTP2Q6DN12 878 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 TWF2Q6IBS0 349 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 VPS52Q8N1B4 723 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 TMEM169Q96HH4 297 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 CEP89Q96ST8 783 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 FDXACB1Q9BRP7 624 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 GBP3Q9H0R5 595 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 DNAJB4Q9UDY4 337 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 PIN4Q9Y237 131 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
LINC00963-214ENST00000622680 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
LINC00963-214ENST00000622680 NOTCH4Q99466 2003 aa12.33□□□□□ -0.43
LINC00963-214ENST00000622680 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 ST18O60284 1047 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 PSMD10O75832 226 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 CXCL14O95715 111 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 EOMESO95936 686 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 SFNP31947 248 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 ALDH7A1P49419 539 aaKnown RBP12.33□□□□□ -0.44
LINC00963-214ENST00000622680 JAK3P52333 1124 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
LINC00963-214ENST00000622680 ITIH3Q06033 890 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 KSR1Q8IVT5 923 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 TBCKQ8TEA7 893 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 NECTIN4Q96NY8 510 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 RIT2Q99578 217 aa12.33□□□□□ -0.44
LINC00963-214ENST00000622680 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-214ENST00000622680 TBC1D13Q9NVG8 400 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms