RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 CPT1AP50416 773 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 USP11P51784 963 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 EFNA5P52803 228 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 PSMC5P62195 406 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 ZBED6P86452 979 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 CCDC68Q9H2F9 335 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 DISC1Q9NRI5 854 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 RAB20Q9NX57 234 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 SEL1LQ9UBV2 794 aa11.21□□□□□ -0.61
COL25A1-209ENST00000622134 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.62
COL25A1-209ENST00000622134 YY1P25490 414 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 TFAMQ00059 246 aaKnown RBP11.21□□□□□ -0.62
COL25A1-209ENST00000622134 MYL7Q01449 175 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.62
COL25A1-209ENST00000622134 BBOF1Q8ND07 529 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 UIMC1Q96RL1 719 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 MXD3Q9BW11 206 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 ETAA1Q9NY74 926 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.62
COL25A1-209ENST00000622134 A6NJR5 290 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 MYO1FO00160 1098 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SLC26A4O43511 780 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 FAM186BQ8IYM0 893 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SIX6OS1Q8N1H7 587 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 IL17RAQ96F46 866 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CYP2D7A0A087X1C5 515 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 RRN3P2A6NIE6 340 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CXCL11O14625 94 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SH3BP5O60239 455 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 STMN1P16949 149 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 QARSP47897 775 aaKnown RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 EHHADHQ08426 723 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 A0A087WWV3 80 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 THAP12O43422 761 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SRGAP2CP0DJJ0 459 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 DEUP1Q05D60 604 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 PFKFB3Q16875 520 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 MTRQ99707 1265 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 LSM14BQ9BX40 385 aaKnown RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CD248Q9HCU0 757 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 PXDNLA1KZ92 1463 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CARNS1A5YM72 827 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 LARGE1O95461 756 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SUPT20HL2P0C7V6 817 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CYP2B6P20813 491 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 SLC12A2P55011 1212 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 QRICH1Q2TAL8 776 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 ACBD5Q5T8D3 534 aaPredicted RBP11.2□□□□□ -0.62
COL25A1-209ENST00000622134 CYB5D1Q6P9G0 228 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 GJA10Q969M2 543 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 RILPQ96NA2 401 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 USTQ9Y2C2 406 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
COL25A1-209ENST00000622134 NEURL4Q96JN8 1562 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 CCDC188H7C350 402 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 ASAP2O43150 1006 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 AP3M2P53677 418 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 IFRD2Q12894 506 aaPredicted RBP11.19□□□□□ -0.62
COL25A1-209ENST00000622134 PRPSAP1Q14558 356 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 RINT1Q6NUQ1 792 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 ZBTB10Q96DT7 871 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 FGFR1OP2Q9NVK5 253 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 PCDHA10Q9Y5I2 948 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 PASKQ96RG2 1323 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 MARK3P27448 753 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 RAD23BP54727 409 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 ARPP19P56211 112 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 ITIH3Q06033 890 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 LAMB3Q13751 1172 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 ZNF560Q96MR9 790 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL25A1-209ENST00000622134 CACYBPQ9HB71 228 aaKnown RBP11.19□□□□□ -0.62
COL25A1-209ENST00000622134 FLT1P17948 1338 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 HUS1O60921 280 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 CRCPO75575 148 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 FAM107AO95990 144 aa11.19□□□□□ -0.62
COL25A1-209ENST00000622134 PLA2G4BP0C869 781 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms