RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 HPCAL4Q9UM19 191 aa9.91□□□□□ -0.82
ITSN2-213ENST00000622089 A0A1B0GW55 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L2P0CJ85 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L3P0CJ86 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L4P0CJ87 422 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L5P0CJ88 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L6P0CJ89 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4L7P0CJ90 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ROR1Q01973 937 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 RWDD4Q6NW29 188 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 KRT27Q7Z3Y8 459 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 NUDCD3Q8IVD9 361 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 SH3TC2Q8TF17 1288 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 MMTAG2Q9BU76 263 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 WWP1Q9H0M0 922 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ANTXR1Q9H6X2 564 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 DUX4Q9UBX2 424 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 UBE4BO95155 1302 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 LRRC53A6NM62 1247 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 NECTIN1Q15223 517 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 LRRC8BQ6P9F7 803 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 LRRC31Q6UY01 552 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 XXYLT1Q8NBI6 393 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 PBXIP1Q96AQ6 731 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 EDEM3Q9BZQ6 932 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 HACD3Q9P035 362 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ZSWIM5Q9P217 1185 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 SUFUQ9UMX1 484 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 RNF103-CHMP3A0A140T963 221 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 HSPA9P38646 679 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 STAT4Q14765 748 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 C2orf40Q9H1Z8 148 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 PTCH1Q13635 1447 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 A0A1W2PQC6 194 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 HNRNPRO43390 633 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 SLC16A2P36021 539 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 GPC3P51654 580 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 ABCE1P61221 599 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 UNC5CLQ8IV45 518 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 OR6B3Q8NGW1 331 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 NUP85Q9BW27 656 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 TOPORSQ9NS56 1045 aaPredicted RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 TBC1D22BQ9NU19 505 aa9.9□□□□□ -0.82
ITSN2-213ENST00000622089 CDV3Q9UKY7 258 aaKnown RBP9.9□□□□□ -0.82
ITSN2-213ENST00000622089 HMGB3O15347 200 aaKnown RBP9.9□□□□□ -0.83
ITSN2-213ENST00000622089 SLC26A4O43511 780 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.83
ITSN2-213ENST00000622089 GNAT1P11488 350 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 AP1B1Q10567 949 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.83
ITSN2-213ENST00000622089 PTK2BQ14289 1009 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 INPP5AQ14642 412 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 UBE2SQ16763 222 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.83
ITSN2-213ENST00000622089 USPL1Q5W0Q7 1092 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 TMEM179Q6ZVK1 233 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 ULK4Q96C45 1275 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 OTUB1Q96FW1 271 aaPredicted RBP9.9□□□□□ -0.83
ITSN2-213ENST00000622089 EEF2KMTQ96G04 330 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 FAM20AQ96MK3 541 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 FAM161BQ96MY7 647 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 VPS11Q9H270 941 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 STAP1Q9ULZ2 295 aa9.9□□□□□ -0.83
ITSN2-213ENST00000622089 BICRAQ9NZM4 1560 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 PSMD3O43242 534 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 HADHAP40939 763 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 SLC1A1P43005 524 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 PHKA2P46019 1235 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 GRIN1Q05586 938 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 RHOT1Q8IXI2 618 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 SH3GL3Q99963 347 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 PUS7LQ9H0K6 701 aaKnown RBP9.89□□□□□ -0.83
ITSN2-213ENST00000622089 GOLPH3LQ9H4A5 285 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 TRAF3IP3Q9Y228 551 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 ELF1P32519 619 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 E2F4Q16254 413 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 CDO1Q16878 200 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 BEST2Q8NFU1 509 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 DACH2Q96NX9 599 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 INTS2Q9H0H0 1204 aaKnown RBP9.89□□□□□ -0.83
ITSN2-213ENST00000622089 VIPAS39Q9H9C1 493 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 MORC2Q9Y6X9 1032 aaPredicted RBP9.89□□□□□ -0.83
ITSN2-213ENST00000622089 POTEB3A0JP26 581 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 KRT14P02533 472 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 BRAFP15056 766 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 SFNP31947 248 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 TMEM259Q4ZIN3 620 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 POTEBQ6S5H4 581 aa9.89□□□□□ -0.83
ITSN2-213ENST00000622089 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms