RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RAB30Q15771 203 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 FAM102BQ5T8I3 360 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 USP49Q70CQ1 688 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 TMCO2Q7Z6W1 182 aaPredicted RBP20.29■□□□□ 0.84
LITAF-220ENST00000620789 RASSF8Q8NHQ8 419 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
LITAF-220ENST00000620789 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 GJB5O95377 273 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 PLCG1P19174 1290 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 FGFR4P22455 802 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
LITAF-220ENST00000620789 TXLNAP40222 546 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 PHKA2P46019 1235 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 POU5F1BQ06416 359 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 CAPSQ13938 189 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 SRGAP1Q7Z6B7 1085 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
LITAF-220ENST00000620789 SYT2Q8N9I0 419 aaPredicted RBP20.28■□□□□ 0.84
LITAF-220ENST00000620789 KCNG4Q8TDN1 519 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 TOP1MTQ969P6 601 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 MSRAQ9UJ68 235 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
LITAF-220ENST00000620789 DENND3A2RUS2 1198 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 MGEA5O60502 916 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 PLA2G4BP0C869 781 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.84
LITAF-220ENST00000620789 SLC12A3P55017 1021 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 NUCB2P80303 420 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 RINT1Q6NUQ1 792 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 LRRC15Q8TF66 581 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 ADAM2Q99965 735 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 ZBED2Q9BTP6 218 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 RUSC1Q9BVN2 902 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.84
LITAF-220ENST00000620789 YBX2Q9Y2T7 364 aaKnown RBP20.27■□□□□ 0.84
LITAF-220ENST00000620789 TLL1O43897 1013 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 CUTAO60888 179 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
LITAF-220ENST00000620789 PTENP60484 403 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 DSC3Q14574 896 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 FAM117BQ6P1L5 589 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 C1orf186Q6ZWK4 172 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 IFNLR1Q8IU57 520 aaPredicted RBP20.26■□□□□ 0.83
LITAF-220ENST00000620789 KIFAP3Q92845 792 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 TIFAQ96CG3 184 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 NFKBIZQ9BYH8 718 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 MINDY3Q9H8M7 445 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 BLOC1S4Q9NUP1 217 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 RCOR1Q9UKL0 485 aa20.26■□□□□ 0.83
LITAF-220ENST00000620789 CHD9Q3L8U1 2897 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 TMEM265A0A087WTH1 108 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 UPP2O95045 317 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 MYOGP15173 224 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
LITAF-220ENST00000620789 GUCY2CP25092 1073 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 KRT85P78386 507 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 CATSPER4Q7RTX7 472 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 RAD54LQ92698 747 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 RAD9AQ99638 391 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 KCND2Q9NZV8 630 aa20.25■□□□□ 0.83
LITAF-220ENST00000620789 LRRIQ4A6NIV6 560 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 HIP1RO75146 1068 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 NCLP19338 710 aaKnown RBP20.24■□□□□ 0.83
LITAF-220ENST00000620789 ME1P48163 572 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 HTRA4P83105 476 aaPredicted RBP20.24■□□□□ 0.83
LITAF-220ENST00000620789 PCBP1Q15365 356 aaKnown RBP eCLIP20.24■□□□□ 0.83
LITAF-220ENST00000620789 AXDND1Q5T1B0 1012 aaPredicted RBP20.24■□□□□ 0.83
LITAF-220ENST00000620789 ZNF697Q5TEC3 545 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 SLC24A5Q71RS6 500 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 CRIPAKQ8N1N5 446 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 BSNDQ8WZ55 320 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
LITAF-220ENST00000620789 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 DRC1Q96MC2 740 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 NKX2-4Q9H2Z4 354 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 POLD4Q9HCU8 107 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 CHST12Q9NRB3 414 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 STK17AQ9UEE5 414 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 TTC3P53804 2025 aa20.24■□□□□ 0.83
LITAF-220ENST00000620789 C9IYK1 514 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 INO80B-WBP1J3KQ70 363 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 CA3P07451 260 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 NAMPTP43490 491 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
LITAF-220ENST00000620789 MBTD1Q05BQ5 628 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 MAPK7Q13164 816 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 MCM6Q14566 821 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 PPP2R5AQ15172 486 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 RRAGBQ5VZM2 374 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
LITAF-220ENST00000620789 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 DAW1Q8N136 415 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 IFT74Q96LB3 600 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 SLC28A3Q9HAS3 691 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 AGPAT5Q9NUQ2 364 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 PCDHA7Q9UN72 937 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms