RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 DUSP28Q4G0W2 176 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 BMP8AQ7Z5Y6 402 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 SESTD1Q86VW0 696 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 FAM169BQ8N8A8 192 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 CTAGE1Q96RT6 745 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 LACRTQ9GZZ8 138 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
SENP3-210ENST00000619785 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 ALG13Q9NP73 1137 aaKnown RBP8.61□□□□□ -1.03
SENP3-210ENST00000619785 FEM1BQ9UK73 627 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 TNNQ9UQP3 1299 aa8.61□□□□□ -1.03
SENP3-210ENST00000619785 RIF1Q5UIP0 2472 aaKnown RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 DCXO43602 365 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 PRKAB2O43741 272 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 ZBED4O75132 1171 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 GJB5O95377 273 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 IGBP1P78318 339 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 IKBKEQ14164 716 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 CTR9Q6PD62 1173 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 VN1R5Q7Z5H4 357 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 ERC1Q8IUD2 1116 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 ANKRD35Q8N283 1001 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 GRIN3AQ8TCU5 1115 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 ARNTL2Q8WYA1 636 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 ACAD9Q9H845 621 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 TRMT13Q9NUP7 481 aaKnown RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 ARPP21Q9UBL0 812 aaPredicted RBP8.6□□□□□ -1.03
SENP3-210ENST00000619785 SLC6A14Q9UN76 642 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 MYH6P13533 1939 aa8.6□□□□□ -1.03
SENP3-210ENST00000619785 KIAA1671Q9BY89 1806 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 CYP2D7A0A087X1C5 515 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 LCHNA4D1U4 455 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 CDC45O75419 566 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 CYP2C9P11712 490 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 IL9P15248 144 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 NOVP48745 357 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 WDR5P61964 334 aaKnown RBP8.59□□□□□ -1.03
SENP3-210ENST00000619785 PSMC6P62333 389 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 RPL6Q02878 288 aaKnown RBP8.59□□□□□ -1.03
SENP3-210ENST00000619785 CLCQ05315 142 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 ZP2Q05996 745 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 AP3B2Q13367 1082 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 TMEM63BQ5T3F8 832 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 CAGE1Q8TC20 777 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 NUP88Q99567 741 aaPredicted RBP8.59□□□□□ -1.03
SENP3-210ENST00000619785 DNAJC7Q99615 494 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 ADAM19Q9H013 955 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 AP5M1Q9H0R1 490 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 ARMT1Q9H993 441 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 RAVER2Q9HCJ3 691 aaKnown RBP8.59□□□□□ -1.03
SENP3-210ENST00000619785 CYP39A1Q9NYL5 469 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 MAPK8IP1Q9UQF2 711 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 PCDHB14Q9Y5E9 798 aa8.59□□□□□ -1.03
SENP3-210ENST00000619785 LINC01553A4QN01 128 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 PPP1R12AO14974 1030 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 PDPK1O15530 556 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 DYNC1LI2O43237 492 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 KPNA6O60684 536 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 BCAR3O75815 825 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 MBD4O95243 580 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 ESRRAP11474 423 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 PTGS1P23219 599 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 EDNRBP24530 442 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 CPT1AP50416 773 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 HTRA4P83105 476 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 OS9Q13438 667 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 HERC4Q5GLZ8 1057 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 LSRQ86X29 649 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 STK35Q8TDR2 534 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 GDPD5Q8WTR4 605 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 APPBP2Q92624 585 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 TGS1Q96RS0 853 aaKnown RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 RAD9AQ99638 391 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 MTG1Q9BT17 334 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 AVENQ9NQS1 362 aaPredicted RBP8.58□□□□□ -1.04
SENP3-210ENST00000619785 PDGFCQ9NRA1 345 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 MTMR4Q9NYA4 1195 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 GVINP1Q7Z2Y8 2422 aa8.58□□□□□ -1.04
SENP3-210ENST00000619785 PTPRZ1P23471 2315 aaPredicted RBP8.57□□□□□ -1.04
SENP3-210ENST00000619785 ABHD14A-ACY1A0A1B0GW23 586 aa8.57□□□□□ -1.04
SENP3-210ENST00000619785 NKRFO15226 690 aaKnown RBP eCLIP8.57□□□□□ -1.04
SENP3-210ENST00000619785 EFCAB14O75071 495 aa8.57□□□□□ -1.04
SENP3-210ENST00000619785 CDC27P30260 824 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms