RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 EYA4O95677 639 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 ZSCAN22P10073 491 aaPredicted RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 GLRA2P23416 452 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 CDC25AP30304 524 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 LONP1P36776 959 aaKnown RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 CCT6AP40227 531 aaKnown RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 PTENP60484 403 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 ERVK-21P61565 698 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 GRB10Q13322 594 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 CAPSQ13938 189 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 SLC39A14Q15043 492 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 AMHR2Q16671 573 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 KRT79Q5XKE5 535 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 CDCA2Q69YH5 1023 aaPredicted RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 KCNK18Q7Z418 384 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 SRGAP1Q7Z6B7 1085 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 MYOCDQ8IZQ8 938 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 MCPH1Q8NEM0 835 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 LRRC15Q8TF66 581 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 KCNN1Q92952 543 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 CLP1Q92989 425 aaKnown RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 INO80BQ9C086 356 aaPredicted RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 CCSER1Q9C0I3 900 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 MINDY3Q9H8M7 445 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 SLC28A3Q9HAS3 691 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 DDX19AQ9NUU7 478 aaKnown RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 FBXO2Q9UK22 296 aaPredicted RBP9.18□□□□□ -0.94
NEK3-209ENST00000618856 GINS2Q9Y248 185 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 XIRP2A4UGR9 3374 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 MYH15Q9Y2K3 1946 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 A0A0U1RQF3 1178 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 E9PMD0 336 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 LPXNO60711 386 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 ZNF623O75123 536 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
NEK3-209ENST00000618856 PKP1Q13835 747 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 C1orf186Q6ZWK4 172 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 CMTR2Q8IYT2 770 aaKnown RBP9.17□□□□□ -0.94
NEK3-209ENST00000618856 DAW1Q8N136 415 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 SYT2Q8N9I0 419 aaPredicted RBP9.17□□□□□ -0.94
NEK3-209ENST00000618856 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 PPP1R16BQ96T49 567 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 ADAM2Q99965 735 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 BHMT2Q9H2M3 363 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 AGPAT5Q9NUQ2 364 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 ZDHHC9Q9Y397 364 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 PRUNE2Q8WUY3 3088 aa9.17□□□□□ -0.94
NEK3-209ENST00000618856 UNC80Q8N2C7 3258 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ADGRA3Q8IWK6 1321 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ARHGEF35A5YM69 484 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 EPOPA6NHQ4 379 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 C5orf67F2Z3F1 127 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 CSDE1O75534 798 aaKnown RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 BRD1O95696 1058 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 F13A1P00488 732 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 FGFR4P22455 802 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 SFPQP23246 707 aaKnown RBP eCLIP9.16□□□□□ -0.94
NEK3-209ENST00000618856 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 DDIT3P35638 169 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 MAPK7Q13164 816 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ADGRE1Q14246 886 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 FAM187BQ17R55 369 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 UBXN11Q5T124 520 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ATL3Q6DD88 541 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 RINT1Q6NUQ1 792 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 CABP7Q86V35 215 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 RNF149Q8NC42 400 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 BSNDQ8WZ55 320 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 ZNF668Q96K58 619 aaPredicted RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 NLRP4Q96MN2 994 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 SAMD11Q96NU1 681 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 NTPCRQ9BSD7 190 aaKnown RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 TIPINQ9BVW5 301 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 CCDC113Q9H0I3 377 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 NT5C3AQ9H0P0 336 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 CSRNP2Q9H175 543 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 POLR3FQ9H1D9 316 aaPredicted RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 FZD8Q9H461 694 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 BLOC1S4Q9NUP1 217 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms