RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TRIM6-TRIM34B2RNG4 842 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZNF213O14771 459 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 TM4SF5O14894 197 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 SMARCA5O60264 1052 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 APOBRQ0VD83 1088 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 MTMR1Q13613 665 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 PCBP1Q15365 356 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZFP91Q96JP5 570 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 MXRA8Q9BRK3 442 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 SDF4Q9BRK5 362 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 GLT8D2Q9H1C3 349 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 LY9Q9HBG7 655 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 PLXND1Q9Y4D7 1925 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 A0A0D9SFI3 127 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 NCAM2O15394 837 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 LAMTOR5O43504 91 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ECI2O75521 394 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 EPCAMP16422 314 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ITGB5P18084 799 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 HOXA13P31271 388 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 IFIT1BQ5T764 474 aaKnown RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 SMAP1Q8IYB5 467 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZNF707Q96C28 371 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 TMEM169Q96HH4 297 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 TMEM121BQ9BXQ6 578 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 OSBPL3Q9H4L5 887 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 BCAS3Q9H6U6 928 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 AGO4Q9HCK5 861 aaKnown RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 PARD6AQ9NPB6 346 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 LTB4R2Q9NPC1 389 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 UBN1Q9NPG3 1134 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 IGSF5Q9NSI5 407 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 KANSL3Q9P2N6 904 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZNF292O60281 2723 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 NARSO43776 548 aaKnown RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 N4BP1O75113 896 aaKnown RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 SOD2P04179 222 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ADH1AP07327 375 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 CYP3A4P08684 503 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 FGFR1P11362 822 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 LAMP2P13473 410 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 GNAQP50148 359 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 STAT5BP51692 787 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ACTR2P61160 394 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 DMWDQ09019 674 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 PPM1JQ5JR12 505 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZNF746Q6NUN9 644 aaPredicted RBP5.23□□□□□ -1.57
SNCA-213ENST00000618500 ZNF410Q86VK4 478 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 ABI1Q8IZP0 508 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 TMEM40Q8WWA1 233 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 MYADMQ96S97 322 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 VN1R3Q9BXE9 311 aa5.23□□□□□ -1.57
SNCA-213ENST00000618500 TAF4O00268 1085 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CYTH3O43739 400 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 FOSP01100 380 aaPredicted RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 DARSP14868 501 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 DSG1Q02413 1049 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 AP3B2Q13367 1082 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PDXDC1Q6P996 788 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 SPNS2Q8IVW8 549 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 VPS52Q8N1B4 723 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 STAG2Q8N3U4 1231 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CNNM3Q8NE01 707 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 SMARCC2Q8TAQ2 1214 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PGBD4Q96DM1 585 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CCDC51Q96ER9 411 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PHF12Q96QT6 1004 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PIGSQ96S52 555 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CHRDQ9H2X0 955 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 ZSWIM5Q9P217 1185 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 WASF3Q9UPY6 502 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 MRPS17Q9Y2R5 130 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 SUPT16HQ9Y5B9 1047 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 EVPLQ92817 2033 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CCDC163A0A0D9SF12 145 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 MAN2B1O00754 1011 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 ATP9AO75110 1047 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 EPN2O95208 641 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 GALTP07902 379 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 ZSCAN20P17040 1043 aaPredicted RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 KLRC1P26715 233 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PHKA2P46019 1235 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 ALDH7A1P49419 539 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 SETQ01105 290 aaPredicted RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 TROAPQ12815 778 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 AAMPQ13685 434 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 COL9A2Q14055 689 aaPredicted RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 IMMTQ16891 758 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 RRP12Q5JTH9 1297 aaKnown RBP5.22□□□□□ -1.57
SNCA-213ENST00000618500 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 LILRA6Q6PI73 481 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PRR23CQ6ZRP0 262 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 WDR5BQ86VZ2 330 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 RDM1Q8NG50 284 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 GPR152Q8TDT2 470 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 ATRIPQ8WXE1 791 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 CRYGNQ8WXF5 182 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 MAP4K1Q92918 833 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 RPS6KC1Q96S38 1066 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms