RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 CHST13Q8NET6 341 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 LMBR1Q8WVP7 490 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 CNGA1P29973 690 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 PDE4DQ08499 809 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 CCSAPQ6IQ19 270 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 WDR75Q8IWA0 830 aaKnown RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 TCHPQ9BT92 498 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 SLC45A1Q9Y2W3 748 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 SLC25A27O95847 323 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 ALDH5A1P51649 535 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 C10orf62Q5T681 223 aaPredicted RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 DRC7Q8IY82 874 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 ERP27Q96DN0 273 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
SRRT-216ENST00000618262 GSDMAQ96QA5 445 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 OSBPL9Q96SU4 736 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 MROH8Q9H579 483 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 ELP1O95163 1332 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 LOC285556D6RIA3 1793 aa13.13□□□□□ -0.31
SRRT-216ENST00000618262 RGS20O76081 388 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 MTMR1Q13613 665 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 PTPAQ15257 358 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 ARHGAP29Q52LW3 1261 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 FGD4Q96M96 766 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 KCNH7Q9NS40 1196 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 SSX2IPQ9Y2D8 614 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
SRRT-216ENST00000618262 GPR25O00155 361 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 PIK3CDO00329 1044 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 MEIS1O00470 390 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 MSH4O15457 936 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 NDUFB5O43674 189 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 FDX1P10109 184 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
SRRT-216ENST00000618262 PTPREP23469 700 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 SREBF1P36956 1147 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 SP2Q02086 613 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 GALNT17Q6IS24 598 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 NDUFAF2Q8N183 169 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 SMYD1Q8NB12 490 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 ATRIPQ8WXE1 791 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 JAKMIP2Q96AA8 810 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
SRRT-216ENST00000618262 ITIH3Q06033 890 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 CEP55Q53EZ4 464 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 HAS1Q92839 578 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 MORF4L1Q9UBU8 362 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 FBXO40Q9UH90 709 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.11□□□□□ -0.31
SRRT-216ENST00000618262 ABL1P00519 1130 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 CASP1P29466 404 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 RELL1Q8IUW5 271 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ZNF304Q9HCX3 659 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 TMEM150BA6NC51 233 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ZBTB39O15060 712 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 KIAA0754O94854 1291 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ARIH2O95376 493 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
SRRT-216ENST00000618262 ADCYAP1R1P41586 468 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ROR2Q01974 943 aaKnown RBP13.11□□□□□ -0.31
SRRT-216ENST00000618262 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 LENG9Q96B70 501 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
SRRT-216ENST00000618262 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
SRRT-216ENST00000618262 ZEB2O60315 1214 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 MAPK4P31152 587 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 CSE1LP55060 971 aaKnown RBP13.1□□□□□ -0.31
SRRT-216ENST00000618262 SLMAPQ14BN4 828 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 SYCP3Q8IZU3 236 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms