RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PCDHB7Q9Y5E2 793 aa27.71■■■□□ 2.03
PMS1-220ENST00000618056 A0A087WWV3 80 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 LPXNO60711 386 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 CSDE1O75534 798 aaKnown RBP27.7■■■□□ 2.03
PMS1-220ENST00000618056 SYT1P21579 422 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 FGFR4P22455 802 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 IGFBP4P22692 258 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 CCT6AP40227 531 aaKnown RBP27.7■■■□□ 2.03
PMS1-220ENST00000618056 ARL6IP4Q66PJ3 421 aaKnown RBP27.7■■■□□ 2.03
PMS1-220ENST00000618056 CHST12Q9NRB3 414 aa27.7■■■□□ 2.03
PMS1-220ENST00000618056 GRB10Q13322 594 aa27.7■■■□□ 2.02
PMS1-220ENST00000618056 SRGAP1Q7Z6B7 1085 aa27.7■■■□□ 2.02
PMS1-220ENST00000618056 CMTR2Q8IYT2 770 aaKnown RBP27.7■■■□□ 2.02
PMS1-220ENST00000618056 CLP1Q92989 425 aaKnown RBP27.7■■■□□ 2.02
PMS1-220ENST00000618056 TMEM161AQ9NX61 479 aa27.7■■■□□ 2.02
PMS1-220ENST00000618056 LINC00271P0C7V0 271 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 SRGAP2CP0DJJ0 459 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 BTG3Q14201 252 aaPredicted RBP27.69■■■□□ 2.02
PMS1-220ENST00000618056 EPC2Q52LR7 807 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 SNX29Q8TEQ0 813 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 DACT1Q9NYF0 836 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 RWDD3Q9Y3V2 267 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 MTCH2Q9Y6C9 303 aa27.69■■■□□ 2.02
PMS1-220ENST00000618056 MYO7AQ13402 2215 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 GTPBP6O43824 516 aaPredicted RBP27.68■■■□□ 2.02
PMS1-220ENST00000618056 USO1O60763 962 aaKnown RBP27.68■■■□□ 2.02
PMS1-220ENST00000618056 ARL2P36404 184 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 POU5F1BQ06416 359 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 ECM1Q16610 540 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 TMEM192Q8IY95 271 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 RNF149Q8NC42 400 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 MCPH1Q8NEM0 835 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 FBXO22Q8NEZ5 403 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 GDPD5Q8WTR4 605 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 TRAIPQ9BWF2 469 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 LMCD1Q9NZU5 365 aa27.68■■■□□ 2.02
PMS1-220ENST00000618056 BMP15O95972 392 aa27.67■■■□□ 2.02
PMS1-220ENST00000618056 KRT79Q5XKE5 535 aa27.67■■■□□ 2.02
PMS1-220ENST00000618056 HSCBQ8IWL3 235 aa27.67■■■□□ 2.02
PMS1-220ENST00000618056 BRWD1Q9NSI6 2320 aa27.67■■■□□ 2.02
PMS1-220ENST00000618056 A0A0U1RQF3 1178 aa27.66■■■□□ 2.02
PMS1-220ENST00000618056 TFDP1Q14186 410 aa27.66■■■□□ 2.02
PMS1-220ENST00000618056 CATSPER4Q7RTX7 472 aa27.66■■■□□ 2.02
PMS1-220ENST00000618056 IFNLR1Q8IU57 520 aaPredicted RBP27.66■■■□□ 2.02
PMS1-220ENST00000618056 MINDY3Q9H8M7 445 aa27.66■■■□□ 2.02
PMS1-220ENST00000618056 KIAA1024Q9UPX6 916 aa27.66■■■□□ 2.02
PMS1-220ENST00000618056 ARHGEF35A5YM69 484 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 PP2D1A8MPX8 630 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 C5orf67F2Z3F1 127 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 PHKA2P46019 1235 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 PTENP60484 403 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 PCBP1Q15365 356 aaKnown RBP eCLIP27.65■■■□□ 2.02
PMS1-220ENST00000618056 PADI6Q6TGC4 694 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 ECHDC2Q86YB7 292 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 ASAP3Q8TDY4 903 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 MMTAG2Q9BU76 263 aaKnown RBP27.65■■■□□ 2.02
PMS1-220ENST00000618056 FOXD4L1Q9NU39 408 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 AGPAT5Q9NUQ2 364 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 DDX19AQ9NUU7 478 aaKnown RBP27.65■■■□□ 2.02
PMS1-220ENST00000618056 MYH15Q9Y2K3 1946 aa27.65■■■□□ 2.02
PMS1-220ENST00000618056 RB1P06400 928 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 GLRA2P23416 452 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 BMPR1AP36894 532 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 RESTQ13127 1097 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 CAPSQ13938 189 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 NFKBIZQ9BYH8 718 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 POLR3FQ9H1D9 316 aaPredicted RBP27.64■■■□□ 2.02
PMS1-220ENST00000618056 MTMR6Q9Y217 621 aa27.64■■■□□ 2.02
PMS1-220ENST00000618056 PIN4Q9Y237 131 aaKnown RBP27.64■■■□□ 2.02
PMS1-220ENST00000618056 SPTBN5Q9NRC6 3674 aaKnown RBP27.64■■■□□ 2.02
PMS1-220ENST00000618056 VWA3AA6NCI4 1184 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 H3BNC9 293 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 HOXA2O43364 376 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 EOMESO95936 686 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 CYP11B2P19099 503 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 IBSPP21815 317 aaPredicted RBP27.64■■■□□ 2.01
PMS1-220ENST00000618056 CDC25AP30304 524 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 GATMP50440 423 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 FAM102BQ5T8I3 360 aa27.64■■■□□ 2.01
PMS1-220ENST00000618056 ZNF598Q86UK7 904 aaKnown RBP27.64■■■□□ 2.01
PMS1-220ENST00000618056 MRPL42Q9Y6G3 142 aaKnown RBP27.64■■■□□ 2.01
PMS1-220ENST00000618056 CTNNB1P35222 781 aa27.63■■■□□ 2.01
PMS1-220ENST00000618056 PAN2Q504Q3 1202 aaKnown RBP27.63■■■□□ 2.01
PMS1-220ENST00000618056 HYIQ5T013 277 aa27.63■■■□□ 2.01
PMS1-220ENST00000618056 KCTD17Q8N5Z5 321 aa27.63■■■□□ 2.01
PMS1-220ENST00000618056 BHMT2Q9H2M3 363 aa27.63■■■□□ 2.01
PMS1-220ENST00000618056 ATG2AQ2TAZ0 1938 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 STX6O43752 255 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 SF3A1Q15459 793 aaKnown RBP27.62■■■□□ 2.01
PMS1-220ENST00000618056 TWF2Q6IBS0 349 aaKnown RBP27.62■■■□□ 2.01
PMS1-220ENST00000618056 AK8Q96MA6 479 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 PLVAPQ9BX97 442 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 GPRC5CQ9NQ84 441 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 RNF19AQ9NV58 838 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 DNM3Q9UQ16 869 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 MYH11P35749 1972 aa27.62■■■□□ 2.01
PMS1-220ENST00000618056 TBKBP1A7MCY6 615 aa27.61■■■□□ 2.01
PMS1-220ENST00000618056 EYA4O95677 639 aa27.61■■■□□ 2.01
PMS1-220ENST00000618056 FGFR1P11362 822 aa27.61■■■□□ 2.01
PMS1-220ENST00000618056 SKIP12755 728 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms