RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SREBF1P36956 1147 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 NBL1P41271 181 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.86
GPC6-202ENST00000617456 NAPAP54920 295 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 PLCB3Q01970 1234 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 SETDB1Q15047 1291 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 PFKFB3Q16875 520 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 RARS2Q5T160 578 aaKnown RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 FAM160B1Q5W0V3 765 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 BLOC1S2Q6QNY1 142 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ABI1Q8IZP0 508 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ADSSL1Q8N142 457 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 C12orf76Q8N812 135 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 BICD2Q8TD16 824 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 RASGRP4Q8TDF6 673 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 NKD2Q969F2 451 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 CASD1Q96PB1 797 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 TM6SF1Q9BZW5 370 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ZMYND12Q9H0C1 365 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ADAM7Q9H2U9 754 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 AGO4Q9HCK5 861 aaKnown RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 TMEM161AQ9NX61 479 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 SPG21Q9NZD8 308 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 HCFC2Q9Y5Z7 792 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 MYO15AQ9UKN7 3530 aa9.65□□□□□ -0.87
GPC6-202ENST00000617456 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 GOLGA8BA8MQT2 603 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 CCNE2O96020 404 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 PPM1AP35813 382 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 ID4P47928 161 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 ADCY7P51828 1080 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 CRYBB1P53674 252 aaPredicted RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 SATB1Q01826 763 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 DSC3Q14574 896 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 SMC1AQ14683 1233 aaKnown RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 ZNF484Q5JVG2 852 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 CCDC60Q8IWA6 550 aaPredicted RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 LRRC43Q8N309 656 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 TMEM87AQ8NBN3 555 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 CRYGNQ8WXF5 182 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 ZNF668Q96K58 619 aaPredicted RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 NECTIN4Q96NY8 510 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 C6orf50Q9HD87 102 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 ZNF302Q9NR11 478 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 TBC1D22BQ9NU19 505 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
GPC6-202ENST00000617456 SNX14Q9Y5W7 946 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 WDR87Q6ZQQ6 2873 aa9.64□□□□□ -0.87
GPC6-202ENST00000617456 EVPLQ92817 2033 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 IGKV6D-21A0A0A0MT36 114 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 NT5C1B-RDH14C9J2C7 533 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 RIOK3O14730 519 aaKnown RBP9.63□□□□□ -0.87
GPC6-202ENST00000617456 HOXA2O43364 376 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 GPR32O75388 356 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 CXCL14O95715 111 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 IFNAR1P17181 557 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
GPC6-202ENST00000617456 ZNF76P36508 570 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 MTHFRP42898 656 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 CLCN3P51790 818 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 FAM189BP81408 668 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ITIH3Q06033 890 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ZKSCAN8Q15776 578 aaPredicted RBP9.63□□□□□ -0.87
GPC6-202ENST00000617456 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 MIS18BP1Q6P0N0 1132 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ABHD15Q6UXT9 468 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 Q6ZUG5 572 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 EXOC8Q8IYI6 725 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 MRPL43Q8N983 215 aaKnown RBP9.63□□□□□ -0.87
GPC6-202ENST00000617456 ANO3Q9BYT9 981 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ELAC1Q9H777 363 aaKnown RBP9.63□□□□□ -0.87
GPC6-202ENST00000617456 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 COL1A2P08123 1366 aa9.63□□□□□ -0.87
GPC6-202ENST00000617456 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms