RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 MAATS1Q7Z4T9 603 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 POP1Q99575 1024 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 AJAP1Q9UKB5 411 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 PPP1R12BO60237 982 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 AFPP02771 609 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 CYFIP1Q7L576 1253 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 GMLQ99445 158 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 NAP1L4Q99733 375 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 KLC4Q9NSK0 619 aa15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 BCCIPQ9P287 314 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHROOM1-208ENST00000617339 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 CALUO43852 315 aaPredicted RBP15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 CFAP58Q5T655 872 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 PAPD7Q5XG87 772 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 BAP1Q92560 729 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 SPON1Q9HCB6 807 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 ANKRD31Q8N7Z5 1873 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 EYA4O95677 639 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 VCAM1P19320 739 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 ELF1P32519 619 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 IQCEQ6IPM2 695 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 TRIM59Q8IWR1 403 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 NFU1Q9UMS0 254 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 PCDHA2Q9Y5H9 948 aa15.71■□□□□ 0.11
SHROOM1-208ENST00000617339 DLATP10515 647 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 UCHL3P15374 230 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 PAX7P23759 505 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 LSP1P33241 339 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 PPP1R2P41236 205 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 FNTAP49354 379 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 DLG4P78352 724 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 NEDD9Q14511 834 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 RNF207Q6ZRF8 634 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 HSD17B14Q9BPX1 270 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 Q4G0T1 1027 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 GLYCTKQ8IVS8 523 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 SLC16A10Q8TF71 515 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 CBWD1Q9BRT8 395 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 MRIQ9BWK5 157 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 FRMD4BQ9Y2L6 1034 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 NFKBIEO00221 500 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 PSMD10O75832 226 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 UGCGQ16739 394 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 SEPT14Q6ZU15 432 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 ZNF473Q8WTR7 871 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 TRIM31Q9BZY9 425 aa15.7■□□□□ 0.1
SHROOM1-208ENST00000617339 GOLGA6L7A0A1B0GV03 622 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 KCNK3O14649 394 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CHUKO15111 745 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 SKAP2O75563 359 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 FAM153BP0C7A2 387 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 TRAF1Q13077 416 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 ITGB3BPQ13352 177 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 FAM153CQ494X1 144 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 ZCWPW2Q504Y3 356 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 C8orf74Q6P047 294 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 AP1M1Q9BXS5 423 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 RNF146Q9NTX7 359 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 FEM1BQ9UK73 627 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 TGFB1I1O43294 461 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CYP3A7P24462 503 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CCDC170Q8IYT3 715 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 SPATA4Q8NEY3 305 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 SH3GL2Q99962 352 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 PON1P27169 355 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MEA1Q16626 185 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MICALCLQ6ZW33 695 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CCDC13Q8IYE1 715 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 RPGRIP1Q96KN7 1286 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 NOX5Q96PH1 765 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 MXRA8Q9BRK3 442 aa15.69■□□□□ 0.1
SHROOM1-208ENST00000617339 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 CBWD6Q4V339 395 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 EPC2Q52LR7 807 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 CBWD3Q5JTY5 395 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 CBWD5Q5RIA9 395 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 SLC40A1Q9NP59 571 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 ASTN1O14525 1302 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 CEP104O60308 925 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 PAFAH1B1P43034 410 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 CARSP49589 748 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 NAA25Q14CX7 972 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 SEZ6Q53EL9 994 aa15.68■□□□□ 0.1
SHROOM1-208ENST00000617339 C2CD6Q53TS8 623 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms