RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 PCDHA12Q9UN75 941 aa16.61■□□□□ 0.25
UBXN1-218ENST00000616865 IGKV6D-21A0A0A0MT36 114 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 SPTLC2O15270 562 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 GLP2RO95838 553 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 PRPHP41219 470 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 MRE11P49959 708 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
UBXN1-218ENST00000616865 SLC39A14Q15043 492 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
UBXN1-218ENST00000616865 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-218ENST00000616865 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 MFSD14AQ96MC6 490 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-218ENST00000616865 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-218ENST00000616865 PCDHGC5Q9Y5F6 944 aa16.6■□□□□ 0.25
UBXN1-218ENST00000616865 CHMP2AO43633 222 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 MGEA5O60502 916 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 CCNE2O96020 404 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-218ENST00000616865 TECP42680 631 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 ME1P48163 572 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 UBE3AQ05086 875 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
UBXN1-218ENST00000616865 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 LINC00301Q8NCQ3 95 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 ATP8B4Q8TF62 1192 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 EDAQ92838 391 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 HAS1Q92839 578 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 GJA10Q969M2 543 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 GBP4Q96PP9 640 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 NOC2LQ9Y3T9 749 aaKnown RBP16.59■□□□□ 0.25
UBXN1-218ENST00000616865 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 TECTAO75443 2155 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 COL1A2P08123 1366 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
UBXN1-218ENST00000616865 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 LOC730098B7Z3J9 87 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 HBP1O60381 514 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 PSMD10O75832 226 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 IBSPP21815 317 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-218ENST00000616865 KLRC1P26715 233 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 PTPAQ15257 358 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 FAM160B1Q5W0V3 765 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 MIER3Q7Z3K6 550 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 CCDC60Q8IWA6 550 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-218ENST00000616865 KRI1Q8N9T8 703 aaKnown RBP16.58■□□□□ 0.24
UBXN1-218ENST00000616865 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 CHAMP1Q96JM3 812 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 RGS18Q9NS28 235 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 C1orf112Q9NSG2 853 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-218ENST00000616865 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 EVPLQ92817 2033 aa16.58■□□□□ 0.24
UBXN1-218ENST00000616865 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 BACH1O14867 736 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 CBX2Q14781 532 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 ODR4Q5SWX8 454 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 SLC24A5Q71RS6 500 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 BMP8AQ7Z5Y6 402 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 ADAM2Q99965 735 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 TLE6Q9H808 572 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 ZNF302Q9NR11 478 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 TLR9Q9NR96 1032 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 AAASQ9NRG9 546 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
UBXN1-218ENST00000616865 MYH9P35579 1960 aaKnown RBP16.57■□□□□ 0.24
UBXN1-218ENST00000616865 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 GOLGA6L4A6NEF3 574 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 WDR64B1ANS9 1081 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 ZBTB42B2RXF5 422 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 C9IYK1 514 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
UBXN1-218ENST00000616865 PPP6R2O75170 966 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 FGF18O76093 207 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 SFNP31947 248 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBXN1-218ENST00000616865 JAK3P52333 1124 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 ZNF484Q5JVG2 852 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 FAM102BQ5T8I3 360 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 TRIM67Q6ZTA4 783 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 MICAL1Q8TDZ2 1067 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms