RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 NYAP2Q9P242 653 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 ADAM21Q9UKJ8 722 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 DENND3A2RUS2 1198 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 FOXP2O15409 715 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 FCGRTP55899 365 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNPH-203ENST00000614659 PRPSAP1Q14558 356 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 ZNF302Q9NR11 478 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 UBE4BO95155 1302 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 FGGP02679 453 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 KAZNQ674X7 775 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 COL23A1Q86Y22 540 aaPredicted RBP15.79■□□□□ 0.12
SNPH-203ENST00000614659 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 PLAAQ9Y263 795 aa15.79■□□□□ 0.12
SNPH-203ENST00000614659 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 C9orf131Q5VYM1 1079 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 FOXN1O15353 648 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 CASP1P29466 404 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 SLC10A5Q5PT55 438 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 RSRC2Q7L4I2 434 aaKnown RBP15.78■□□□□ 0.12
SNPH-203ENST00000614659 EFCC1Q9HA90 598 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 HPS5Q9UPZ3 1129 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 K7ERI5 159 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 PLSCR1O15162 318 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 MSH2P43246 934 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 TTC39CQ8N584 583 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 E9PMD0 336 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 EYA4O95677 639 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 P4HBP07237 508 aaKnown RBP15.78■□□□□ 0.12
SNPH-203ENST00000614659 CHRNA3P32297 505 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 YWHAGP61981 247 aaKnown RBP eCLIP15.78■□□□□ 0.12
SNPH-203ENST00000614659 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 PCGF5Q86SE9 256 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 IL25Q9H293 177 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 EPB41L4AQ9HCS5 686 aaPredicted RBP15.78■□□□□ 0.12
SNPH-203ENST00000614659 WDR70Q9NW82 654 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 DONSONQ9NYP3 566 aa15.78■□□□□ 0.12
SNPH-203ENST00000614659 NOVA2Q9UNW9 492 aaKnown RBP15.78■□□□□ 0.12
SNPH-203ENST00000614659 CIITAP33076 1130 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 ASPHQ12797 758 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 CNPY4Q8N129 248 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 GCOM2Q9BZD3 368 aaPredicted RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 Q9H521 79 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 SPATS2LQ9NUQ6 558 aaKnown RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 ESYT2A0FGR8 921 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 SRGAP2BP0DMP2 458 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 HOXA13P31271 388 aaPredicted RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 PADI6Q6TGC4 694 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 DSTYKQ6XUX3 929 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 TTC13Q8NBP0 860 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 DPF2Q92785 391 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 TTC25Q96NG3 672 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 TRIM4Q9C037 500 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 HMGCS2P54868 508 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 INTS2Q9H0H0 1204 aaKnown RBP15.77■□□□□ 0.12
SNPH-203ENST00000614659 WNT8AQ9H1J5 351 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
SNPH-203ENST00000614659 CNTNAP5Q8WYK1 1306 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 LRRD1A4D1F6 860 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 TJP3O95049 919 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 GYS1P13807 737 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 TRIM72Q6ZMU5 477 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 CENPUQ71F23 418 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 CHST13Q8NET6 341 aa15.77■□□□□ 0.11
SNPH-203ENST00000614659 CCL15-CCL14A0A0B4J2E2 113 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 KIAA0391O15091 583 aaKnown RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 CLTAP09496 248 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 SLC7A5Q01650 507 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 CCL15Q16663 113 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 IPO11Q9UI26 975 aaKnown RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 TACC3Q9Y6A5 838 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 ARHGAP23Q9P227 1491 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 POTEB3A0JP26 581 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 POTECB2RU33 542 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 TBXAS1P24557 533 aaPredicted RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNPH-203ENST00000614659 DHX34Q14147 1143 aaKnown RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 POTEBQ6S5H4 581 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 FBXO33Q7Z6M2 555 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 PSPC1Q8WXF1 523 aaKnown RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 AP1M1Q9BXS5 423 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 CALB1P05937 261 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 PSMD6Q15008 389 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 EPHA7Q15375 998 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 MAPK6Q16659 721 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 TTBK2Q6IQ55 1244 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 FAM49AQ9H0Q0 323 aaPredicted RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 TAF1DQ9H5J8 278 aaPredicted RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 XPAP23025 273 aaPredicted RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 AP3M2P53677 418 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 ANKRD40Q6AI12 368 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 NYAP1Q6ZVC0 841 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 POC1B-GALNT4F8VUJ3 575 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms