RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 MUTP22033 750 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 S100A1P23297 94 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GATA4P43694 442 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TGFB2P61812 414 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SETMARQ53H47 684 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TM4SF20Q53R12 229 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CTRB2Q6GPI1 263 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FAM180BQ6P0A1 224 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CNSTQ6PJW8 725 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CENPQQ7L2Z9 268 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NECAB2Q7Z6G3 386 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CAND1Q86VP6 1230 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FCHSD1Q86WN1 690 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NKAIN4Q8IVV8 208 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CCHCR1Q8TD31 782 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 LPIN2Q92539 896 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FATE1Q969F0 183 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 OSBP2Q969R2 916 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ABHD8Q96I13 439 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SETDB2Q96T68 719 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CARD11Q9BXL7 1154 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FAM126AQ9BYI3 521 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 AGXT2Q9BYV1 514 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 KCNF1Q9H3M0 494 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 BRD9Q9H8M2 597 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 EBF2Q9HAK2 575 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NOP53Q9NZM5 478 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GJD2Q9UKL4 321 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 KCNH4Q9UQ05 1017 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GIT1Q9Y2X7 761 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NFE2L3Q9Y4A8 694 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CD2APQ9Y5K6 639 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SHROOM2Q13796 1616 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ABHD14A-ACY1A0A1B0GW23 586 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 NEURL1BA8MQ27 555 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 USP17L5A8MUK1 530 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 C2CD2LO14523 706 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 HDAC3O15379 428 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ZBTB14O43829 449 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 KATNA1O75449 491 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 POP4O95707 220 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 DDX58O95786 925 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 IFIT1P09914 478 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 POLR2EP19388 210 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ADH7P40394 386 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 C21orf58P58505 322 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 NIPAL4Q0D2K0 466 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 BLMHQ13867 455 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 NDUFA5Q16718 116 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 C15orf59Q2T9L4 293 aaPredicted RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 SUPT20HL1Q3ZLR7 823 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 FBXO43Q4G163 708 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 PRR16Q569H4 304 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 C2orf27AQ580R0 203 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TRIM68Q6AZZ1 485 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ALG1LQ6GMV1 187 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 FAM171BQ6P995 826 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 IGF2-ASQ6U949 168 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TPTE2Q6XPS3 522 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 SLCO4C1Q6ZQN7 724 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 SPATA24Q86W54 205 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 FAM228AQ86W67 206 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC50Q8IVM0 306 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC83Q8IWF9 413 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 FAM26EQ8N5C1 309 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 FBXO30Q8TB52 745 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 MDM1Q8TC05 714 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 HERVK_113Q902F9 699 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 HDAC2Q92769 488 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TTC17Q96AE7 1141 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 MFSD3Q96ES6 412 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 C7orf25Q9BPX7 421 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ADPGKQ9BRR6 497 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ISCA1Q9BUE6 129 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 KATNAL1Q9BW62 490 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 GRIP2Q9C0E4 1043 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TRPV6Q9H1D0 765 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 GOLPH3LQ9H4A5 285 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 KCND1Q9NSA2 647 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 KLHL11Q9NVR0 708 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 HPF1Q9NWY4 346 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 AATFQ9NY61 560 aaKnown RBP eCLIP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TRPM5Q9NZQ8 1165 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF180Q9UJW8 692 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF711Q9Y462 761 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 PCDHB9Q9Y5E1 797 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ELP1O95163 1332 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 SCAF11Q99590 1463 aaKnown RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 ERVV-2B6SEH9 535 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 HOXC11O43248 304 aaPredicted RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 DKC1O60832 514 aaKnown RBP eCLIP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TBC1D8O95759 1140 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 CPEP16870 476 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 SYT1P21579 422 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TBXAS1P24557 533 aaPredicted RBP3.29□□□□□ -1.88
CBWD3-209ENST00000614377 NFKBIAP25963 317 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 TMOD1P28289 359 aa3.29□□□□□ -1.88
CBWD3-209ENST00000614377 GNA15P30679 374 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms