RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 CLUL1Q15846 466 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 WLSQ5T9L3 541 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SLFN11Q7Z7L1 901 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SEC16BQ96JE7 1060 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 RAB17Q9H0T7 212 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 TTC7AQ9ULT0 858 aaPredicted RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 PPP2R3BQ9Y5P8 575 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SBF1O95248 1867 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 MYH7BA7E2Y1 1941 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 GFPT2O94808 682 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 AFPP02771 609 aaKnown RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 UCHL3P15374 230 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 USH1GQ495M9 461 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 HERC4Q5GLZ8 1057 aaPredicted RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 ZNF571Q7Z3V5 609 aaPredicted RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 TMC3Q7Z5M5 1100 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 HOOK3Q86VS8 718 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 METTL13Q8N6R0 699 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SCFD1Q8WVM8 642 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 TATDN2Q93075 761 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 SGSM3Q96HU1 749 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
ATF3-211ENST00000613954 NOVA2Q9UNW9 492 aaKnown RBP12.16□□□□□ -0.46
ATF3-211ENST00000613954 FRMD3A2A2Y4 597 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L15C9J2P7 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L13C9JLJ4 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L11C9JVI0 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L18D6R9N7 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L22D6RA61 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L17D6RBQ6 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L19D6RCP7 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L20D6RJB6 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 EDIL3O43854 480 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 SSBP05455 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATF3-211ENST00000613954 H2AFZP0C0S5 128 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 PLA2G4BP0C869 781 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
ATF3-211ENST00000613954 SLC8A1P32418 973 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L24Q0WX57 530 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
ATF3-211ENST00000613954 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 USP17L6PQ6QN14 398 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 H2AFVQ71UI9 128 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 CROCCP2Q86T23 111 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 NELFCDQ8IXH7 590 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 OR2W6PQ8NHA6 318 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 LPAR1Q92633 364 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.46
ATF3-211ENST00000613954 AP1M1Q9BXS5 423 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 OSBPL7Q9BZF2 842 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 DDX47Q9H0S4 455 aaKnown RBP12.15□□□□□ -0.46
ATF3-211ENST00000613954 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
ATF3-211ENST00000613954 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
ATF3-211ENST00000613954 F8VZ95 297 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 MEIS2O14770 477 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 WDR46O15213 610 aaKnown RBP12.15□□□□□ -0.47
ATF3-211ENST00000613954 DAPK3O43293 454 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 FOSP01100 380 aaPredicted RBP12.15□□□□□ -0.47
ATF3-211ENST00000613954 NR2F2P24468 414 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 NF2P35240 595 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 XRCC4Q13426 336 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 ECM1Q16610 540 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.47
ATF3-211ENST00000613954 HAS1Q92839 578 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 NEUROG2Q9H2A3 272 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.47
ATF3-211ENST00000613954 CD248Q9HCU0 757 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 NENFQ9UMX5 172 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.47
ATF3-211ENST00000613954 CALUO43852 315 aaPredicted RBP12.14□□□□□ -0.47
ATF3-211ENST00000613954 PPFIA2O75334 1257 aa12.14□□□□□ -0.47
ATF3-211ENST00000613954 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
ATF3-211ENST00000613954 KRT18P05783 430 aaKnown RBP12.14□□□□□ -0.47
ATF3-211ENST00000613954 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
ATF3-211ENST00000613954 TMOD1P28289 359 aa12.14□□□□□ -0.47
ATF3-211ENST00000613954 SCTRP47872 440 aa12.14□□□□□ -0.47
ATF3-211ENST00000613954 HIRAP54198 1017 aaPredicted RBP12.14□□□□□ -0.47
ATF3-211ENST00000613954 MAGOHP61326 146 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms