RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
SLIRP-212ENST00000613856 BPIFA3Q9BQP9 254 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 NIFKQ9BYG3 293 aaKnown RBP12.67□□□□□ -0.38
SLIRP-212ENST00000613856 HIPK3Q9H422 1215 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 CD320Q9NPF0 282 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 TET1Q8NFU7 2136 aa12.67□□□□□ -0.38
SLIRP-212ENST00000613856 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 A0A087WWV3 80 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 A6NJR5 290 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 ZBTB39O15060 712 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 B4GALT4O60513 344 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 PPFIA4O75335 1185 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 LGALS2P05162 132 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 PPP1R2P41236 205 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 ZNF131P52739 623 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 NKX3-2P78367 333 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 COASYQ13057 564 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 PSMD2Q13200 908 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 C11orf57Q6ZUT1 292 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 DYMQ7RTS9 669 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 ATP8B4Q8TF62 1192 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 DNAJC25Q9H1X3 360 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-212ENST00000613856 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
SLIRP-212ENST00000613856 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
SLIRP-212ENST00000613856 DGAT1O75907 488 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 CA3P07451 260 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 IDEP14735 1019 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 GAP43P17677 238 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 CPT1AP50416 773 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 TARBP2Q15633 366 aaKnown RBP12.65□□□□□ -0.38
SLIRP-212ENST00000613856 DGKDQ16760 1214 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 UTP14CQ5TAP6 766 aaKnown RBP12.65□□□□□ -0.38
SLIRP-212ENST00000613856 PLA2G4FQ68DD2 849 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 TRIM50Q86XT4 487 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 PCSK9Q8NBP7 692 aaKnown RBP12.65□□□□□ -0.38
SLIRP-212ENST00000613856 GLG1Q92896 1179 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 CEP170P1Q96L14 293 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 ERAP1Q9NZ08 941 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 SEL1LQ9UBV2 794 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 ZNF215Q9UL58 517 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-212ENST00000613856 COL4A3BPQ9Y5P4 624 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
SLIRP-212ENST00000613856 SIP14410 1827 aa12.65□□□□□ -0.39
SLIRP-212ENST00000613856 TANC1Q9C0D5 1861 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 TMEM150BA6NC51 233 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 GOLGA6L3A6NEY3 463 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 ZBBXA8MT70 800 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 TLR3O15455 904 aaKnown RBP12.64□□□□□ -0.39
SLIRP-212ENST00000613856 TLL1O43897 1013 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 USO1O60763 962 aaKnown RBP12.64□□□□□ -0.39
SLIRP-212ENST00000613856 RFC5P40937 340 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 ZNF165P49910 485 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 NPEPPSP55786 919 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 MAPK7Q13164 816 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 ITGA7Q13683 1181 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 PLCB4Q15147 1175 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-212ENST00000613856 FAM26FQ5R3K3 315 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 KIAA0895Q8NCT3 520 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 MCPH1Q8NEM0 835 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 C16orf70Q9BSU1 422 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 AP5M1Q9H0R1 490 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 ATP6V0A4Q9HBG4 840 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 OLFML3Q9NRN5 406 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 PCDHA2Q9Y5H9 948 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 COL1A2P08123 1366 aa12.64□□□□□ -0.39
SLIRP-212ENST00000613856 MUC6Q6W4X9 2439 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 RSPH10B2B2RC85 870 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 DYNC1LI2O43237 492 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-212ENST00000613856 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
SLIRP-212ENST00000613856 HBP1O60381 514 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 HIP1RO75146 1068 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms