RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 POLGP54098 1239 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 TERF1P54274 439 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF365Q70YC5 407 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 CCDC43Q96MW1 224 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 CLIC6Q96NY7 704 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 SH2D3AQ9BRG2 576 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 CELF4Q9BZC1 486 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 TRIM5Q9C035 493 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 MTIF3Q9H2K0 278 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 KCNF1Q9H3M0 494 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 SPTLC3Q9NUV7 552 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 DBR1Q9UK59 544 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 AKT3Q9Y243 479 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 SRPRBQ9Y5M8 271 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 CDY2AQ9Y6F7 541 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 SIP14410 1827 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 PP2D1A8MPX8 630 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 BECN2A8MW95 431 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CDC25AP30304 524 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 UBA7P41226 1012 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CLCN3P51790 818 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 SHHQ15465 462 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 ECM1Q16610 540 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 DPCR1Q3MIW9 517 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 C9orf50Q5SZB4 431 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 HYIQ5T013 277 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CNKSR3Q6P9H4 555 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 KRBA2Q6ZNG9 492 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 FAM43BQ6ZT52 329 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 USP38Q8NB14 1042 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 PIGOQ8TEQ8 1089 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 TCP11Q8WWU5 503 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 HERVK_113Q902F9 699 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 APBB2Q92870 758 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 ERCC4Q92889 916 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 MTRQ99707 1265 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 MMTAG2Q9BU76 263 aaKnown RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 NT5C3AQ9H0P0 336 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 KCNH3Q9ULD8 1083 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 A0A087WWV3 80 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 EFCAB14O75071 495 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 VTNP04004 478 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CRYBB1P53674 252 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 TMEM62Q0P6H9 643 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 LONRF3Q496Y0 759 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 PLEKHG4Q58EX7 1191 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 FBXO47Q5MNV8 452 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 ODR4Q5SWX8 454 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CABP7Q86V35 215 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 SPC24Q8NBT2 197 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 KIAA1524Q8TCG1 905 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 SEPT8Q92599 483 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CDK5RAP3Q96JB5 506 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-217ENST00000611848 CCSER1Q9C0I3 900 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 ATP6V0A4Q9HBG4 840 aa9.78□□□□□ -0.84
SMAD4-217ENST00000611848 MYO9BQ13459 2157 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 ABHD14A-ACY1A0A1B0GW23 586 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 ARHGEF35A5YM69 484 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 IKBKBO14920 756 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 ASAP2O43150 1006 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 GPR32O75388 356 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 EYA4O95677 639 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 GHRP10912 638 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 GPC3P51654 580 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 NLRP11P59045 1033 aaKnown RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 GRIN1Q05586 938 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 DRP2Q13474 957 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 IKBKEQ14164 716 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 LPIN1Q14693 890 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 NOLC1Q14978 699 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 EMC2Q15006 297 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 ZRSR1Q15695 479 aaKnown RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 LRIT3Q3SXY7 679 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 TSHZ1Q6ZSZ6 1077 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 DBF4BQ8NFT6 615 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 CALML4Q96GE6 196 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 FAM13BQ9NYF5 915 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 SUCLA2Q9P2R7 463 aaPredicted RBP9.77□□□□□ -0.85
SMAD4-217ENST00000611848 GINS2Q9Y248 185 aa9.77□□□□□ -0.85
SMAD4-217ENST00000611848 SMTNL1A8MU46 457 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 EIF4BP23588 611 aaKnown RBP9.76□□□□□ -0.85
SMAD4-217ENST00000611848 TXLNAP40222 546 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 GRB10Q13322 594 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms