RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 POLR3FQ9H1D9 316 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-226ENST00000611736 GPRC5CQ9NQ84 441 aa28.93■■■□□ 2.22
VEGFA-226ENST00000611736 LRFN2Q9ULH4 789 aa28.93■■■□□ 2.22
VEGFA-226ENST00000611736 EPOPA6NHQ4 379 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 STAG3L1P0CL83 205 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 ARL2P36404 184 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 MXD4Q14582 209 aaPredicted RBP28.92■■■□□ 2.22
VEGFA-226ENST00000611736 SLC24A5Q71RS6 500 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 CATSPER4Q7RTX7 472 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 BHMT2Q9H2M3 363 aa28.92■■■□□ 2.22
VEGFA-226ENST00000611736 C9IYK1 514 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 RFXAPO00287 272 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 FOXD4L5Q5VV16 416 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-226ENST00000611736 CRIPAKQ8N1N5 446 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 SLC17A8Q8NDX2 589 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 MCPH1Q8NEM0 835 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 FOXD4L4Q8WXT5 416 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-226ENST00000611736 TGS1Q96RS0 853 aaKnown RBP28.91■■■□□ 2.22
VEGFA-226ENST00000611736 ZSCAN16Q9H4T2 348 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-226ENST00000611736 MINDY3Q9H8M7 445 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 PCDHB7Q9Y5E2 793 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 PRUNE2Q8WUY3 3088 aa28.91■■■□□ 2.22
VEGFA-226ENST00000611736 DGKIO75912 1065 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 GLRA2P23416 452 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 PHKA2P46019 1235 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 CEBPZQ03701 1054 aaKnown RBP28.9■■■□□ 2.22
VEGFA-226ENST00000611736 TFDP1Q14186 410 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 ADGRE1Q14246 886 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 FAM102BQ5T8I3 360 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 SRGAP1Q7Z6B7 1085 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 RC3H2Q9HBD1 1191 aaKnown RBP28.9■■■□□ 2.22
VEGFA-226ENST00000611736 DNM3Q9UQ16 869 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 ADGRA3Q8IWK6 1321 aa28.9■■■□□ 2.22
VEGFA-226ENST00000611736 E9PMD0 336 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 CYP11B2P19099 503 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 GATMP50440 423 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 ERVK-21P61565 698 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 GRIN1Q05586 938 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 CAPSQ13938 189 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 PLIN2Q99541 437 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 C17orf80Q9BSJ5 609 aa28.89■■■□□ 2.22
VEGFA-226ENST00000611736 PIN4Q9Y237 131 aaKnown RBP28.89■■■□□ 2.22
VEGFA-226ENST00000611736 IGFBP4P22692 258 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 BTG3Q14201 252 aaPredicted RBP28.88■■■□□ 2.21
VEGFA-226ENST00000611736 PTPAQ15257 358 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 PAN2Q504Q3 1202 aaKnown RBP28.88■■■□□ 2.21
VEGFA-226ENST00000611736 KCNK18Q7Z418 384 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 FIBCD1Q8N539 461 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 ZNF689Q96CS4 500 aaPredicted RBP28.88■■■□□ 2.21
VEGFA-226ENST00000611736 AK8Q96MA6 479 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 PNMA5Q96PV4 448 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 COL4A6Q14031 1691 aa28.88■■■□□ 2.21
VEGFA-226ENST00000611736 EYA4O95677 639 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 MARCKSP29966 332 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-226ENST00000611736 PTENP60484 403 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 FAM189BP81408 668 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 CABP7Q86V35 215 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 CDK5RAP3Q96JB5 506 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 USP28Q96RU2 1077 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 RNF216Q9NWF9 866 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-226ENST00000611736 DACT1Q9NYF0 836 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 NLRC5Q86WI3 1866 aa28.87■■■□□ 2.21
VEGFA-226ENST00000611736 PRRC2BQ5JSZ5 2229 aaKnown RBP28.86■■■□□ 2.21
VEGFA-226ENST00000611736 GRB10Q13322 594 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 HYIQ5T013 277 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 TWF2Q6IBS0 349 aaKnown RBP28.86■■■□□ 2.21
VEGFA-226ENST00000611736 RNF169Q8NCN4 708 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 GDPD5Q8WTR4 605 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 POLD4Q9HCU8 107 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 CHST12Q9NRB3 414 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 TMEM161AQ9NX61 479 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 MYH15Q9Y2K3 1946 aa28.86■■■□□ 2.21
VEGFA-226ENST00000611736 LRRIQ4A6NIV6 560 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 INO80B-WBP1J3KQ70 363 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 LONP1P36776 959 aaKnown RBP28.85■■■□□ 2.21
VEGFA-226ENST00000611736 UBA7P41226 1012 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 ECHDC2Q86YB7 292 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 CMTR2Q8IYT2 770 aaKnown RBP28.85■■■□□ 2.21
VEGFA-226ENST00000611736 MAFAQ8NHW3 353 aaPredicted RBP28.85■■■□□ 2.21
VEGFA-226ENST00000611736 NT5C3AQ9H0P0 336 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 AGPAT5Q9NUQ2 364 aa28.85■■■□□ 2.21
VEGFA-226ENST00000611736 COL4A4P53420 1690 aaPredicted RBP28.85■■■□□ 2.21
VEGFA-226ENST00000611736 ZSCAN22P10073 491 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-226ENST00000611736 FGFR1P11362 822 aa28.84■■■□□ 2.21
VEGFA-226ENST00000611736 EPC2Q52LR7 807 aa28.84■■■□□ 2.21
VEGFA-226ENST00000611736 TMEM192Q8IY95 271 aa28.84■■■□□ 2.21
VEGFA-226ENST00000611736 FBXO22Q8NEZ5 403 aa28.84■■■□□ 2.21
VEGFA-226ENST00000611736 BSNDQ8WZ55 320 aa28.84■■■□□ 2.21
VEGFA-226ENST00000611736 ELAC1Q9H777 363 aaKnown RBP28.84■■■□□ 2.21
VEGFA-226ENST00000611736 FNDC1Q4ZHG4 1894 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-226ENST00000611736 A0A0U1RQF3 1178 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 TBKBP1A7MCY6 615 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 ERLIN2O94905 339 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 SSBP05455 408 aaKnown RBP eCLIP28.83■■■□□ 2.21
VEGFA-226ENST00000611736 MBTD1Q05BQ5 628 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 POU5F1BQ06416 359 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 PKP1Q13835 747 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 TMEM119Q4V9L6 283 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 IFNLR1Q8IU57 520 aaPredicted RBP28.83■■■□□ 2.21
VEGFA-226ENST00000611736 SAMD11Q96NU1 681 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms