RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 OPA1O60313 960 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 DKC1O60832 514 aaKnown RBP eCLIP11.35□□□□□ -0.59
PABPC1-224ENST00000610907 RNF40O75150 1001 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 RPS6KA5O75582 802 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 ZMYND10O75800 440 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 BAG6P46379 1132 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 PAK2Q13177 524 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 COG2Q14746 738 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 KIF22Q14807 665 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 PGM5Q15124 567 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 CLUL1Q15846 466 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-224ENST00000610907 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 MS4A14Q96JA4 679 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
PABPC1-224ENST00000610907 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 SYT11Q9BT88 431 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 TAOK3Q9H2K8 898 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-224ENST00000610907 AJAP1Q9UKB5 411 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-224ENST00000610907 EXOC7Q9UPT5 735 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 NCANO14594 1321 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 WDR64B1ANS9 1081 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 GOLGA8KD6RF30 607 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 DDX39AO00148 427 aaKnown RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 KCNK3O14649 394 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 YWHABP31946 246 aaKnown RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 ACTN2P35609 894 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 LMAN1P49257 510 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 VAMP7P51809 220 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 OAZ1P54368 228 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 GALCP54803 685 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 ENPEPQ07075 957 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 TCEAL1Q15170 157 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 CBWD3Q5JTY5 395 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 CBWD5Q5RIA9 395 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 DCAF15Q66K64 600 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 SND1Q7KZF4 910 aaKnown RBP eCLIP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 PEX26Q7Z412 305 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 CCDC125Q86Z20 511 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 CPXCR1Q8N123 301 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 RASGEF1CQ8N431 466 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 MREGQ8N565 214 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 IL31RAQ8NI17 732 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 LMO3Q8TAP4 145 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 RFFLQ8WZ73 363 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 PKNOX2Q96KN3 472 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 TAAR1Q96RJ0 339 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 C17orf75Q9HAS0 396 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 RAVER2Q9HCJ3 691 aaKnown RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 TTC7AQ9ULT0 858 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-224ENST00000610907 SAMM50Q9Y512 469 aa11.34□□□□□ -0.59
PABPC1-224ENST00000610907 A6NNZ2 444 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 AGPSO00116 658 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PGRMC1O00264 195 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 VCAM1P19320 739 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ABCD1P33897 745 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 GGCXP38435 758 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 SMTNP53814 917 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 HADHBP55084 474 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 SLC7A5Q01650 507 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PPP2R5EQ16537 467 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 TUBB8Q3ZCM7 444 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 LEKR1Q6ZMV7 388 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 OTUD6AQ7L8S5 288 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 KSR1Q8IVT5 923 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 AFAP1L1Q8TED9 768 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 CTNNBL1Q8WYA6 563 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 SH3GL2Q99962 352 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.62e-8■□□□□ 9.6
PABPC1-224ENST00000610907 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ANKRD62A6NC57 917 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms