RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 TMEM117Q9H0C3 514 aa14.4□□□□□ -0.1
SNX20-205ENST00000610485 IFT122Q9HBG6 1241 aa14.4□□□□□ -0.1
SNX20-205ENST00000610485 ALG13Q9NP73 1137 aaKnown RBP14.4□□□□□ -0.1
SNX20-205ENST00000610485 DACT1Q9NYF0 836 aa14.4□□□□□ -0.1
SNX20-205ENST00000610485 COL4A3BPQ9Y5P4 624 aa14.4□□□□□ -0.1
SNX20-205ENST00000610485 EVPLQ92817 2033 aa14.4□□□□□ -0.1
SNX20-205ENST00000610485 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
SNX20-205ENST00000610485 ATP2B1P20020 1258 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 DNAJB1P25685 340 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 MCM7P33993 719 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 XKR9Q5GH70 373 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 TCP11Q8WWU5 503 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 PRPF31Q8WWY3 499 aaKnown RBP14.39□□□□□ -0.11
SNX20-205ENST00000610485 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 NECAB3Q96P71 396 aaPredicted RBP14.39□□□□□ -0.11
SNX20-205ENST00000610485 CWH43Q9H720 699 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 ANKEF1Q9NU02 776 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
SNX20-205ENST00000610485 HCSTQ9UBK5 93 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 PCDHB12Q9Y5F1 795 aa14.39□□□□□ -0.11
SNX20-205ENST00000610485 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 POTEMA6NI47 508 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 NCK2O43639 380 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 ST18O60284 1047 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 EOMESO95936 686 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 LAG3P18627 525 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 KCNA5P22460 613 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 LAMTOR4Q0VGL1 99 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 HYAL1Q12794 435 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 CSPP1Q1MSJ5 1256 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 CTC1Q2NKJ3 1217 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 CLLU1OSQ5K130 101 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 SPOUT1Q5T280 376 aaKnown RBP14.38□□□□□ -0.11
SNX20-205ENST00000610485 FERMT3Q86UX7 667 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 LRRC43Q8N309 656 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 MTRQ99707 1265 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
SNX20-205ENST00000610485 XPNPEP1Q9NQW7 623 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
SNX20-205ENST00000610485 PIN4Q9Y237 131 aaKnown RBP14.38□□□□□ -0.11
SNX20-205ENST00000610485 MYO9BQ13459 2157 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 MUC3AQ02505 3323 aa14.38□□□□□ -0.11
SNX20-205ENST00000610485 CUL9Q8IWT3 2517 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 ASAP2O43150 1006 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 OR52Z1P0C646 297 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 SPATA31C1P0DKV0 1188 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.11
SNX20-205ENST00000610485 PHKA2P46019 1235 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 RARRES1P49788 294 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 UBE3AQ05086 875 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 TTC38Q5R3I4 469 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 LRRC55Q6ZSA7 311 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 SRGAP1Q7Z6B7 1085 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 RNF169Q8NCN4 708 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
SNX20-205ENST00000610485 RSPH1Q8WYR4 309 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 TUFT1Q9NNX1 390 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 AGPAT5Q9NUQ2 364 aa14.37□□□□□ -0.11
SNX20-205ENST00000610485 ZNF623O75123 536 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 DGAT1O75907 488 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 FGF18O76093 207 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 SKIP12755 728 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 XRCC6P12956 609 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNX20-205ENST00000610485 IRS1P35568 1242 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 RAB27AP51159 221 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 GNL2Q13823 731 aaKnown RBP14.36□□□□□ -0.11
SNX20-205ENST00000610485 MXD4Q14582 209 aaPredicted RBP14.36□□□□□ -0.11
SNX20-205ENST00000610485 ZNF174Q15697 407 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
SNX20-205ENST00000610485 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
SNX20-205ENST00000610485 RNF149Q8NC42 400 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 TMX3Q96JJ7 454 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 FAM105AQ9NUU6 356 aa14.36□□□□□ -0.11
SNX20-205ENST00000610485 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
SNX20-205ENST00000610485 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 ATG2AQ2TAZ0 1938 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 H3BQ06 376 aaPredicted RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 MED24O75448 989 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 CSPG5O95196 566 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 CD2BP2O95400 341 aaKnown RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 ARL2P36404 184 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 LTBRP36941 435 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 TECP42680 631 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 POU5F1BQ06416 359 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 KCNT2Q6UVM3 1135 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 CATSPER3Q86XQ3 398 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 IFNLR1Q8IU57 520 aaPredicted RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 THNSL1Q8IYQ7 743 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms