RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MAP4K4O95819 1239 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 HMGCRP04035 888 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ASNSP08243 561 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 CCDC166P0CW27 439 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 AKR1B1P15121 316 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 DESP17661 470 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 NR1D1P20393 614 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ATP4AP20648 1035 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 HOXD10P28358 340 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 HOXA7P31268 230 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 CCT2P78371 535 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 KRT83P78385 493 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ELF3P78545 371 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 SPAG1Q07617 926 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 MAP3K12Q12852 859 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 DPYDQ12882 1025 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 IFT88Q13099 833 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 PABPC4Q13310 644 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSX9-202ENST00000608568 NCOA4Q13772 614 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 NR1I3Q14994 352 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ARHGEF6Q15052 776 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SF3A1Q15459 793 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 CCDC178Q5BJE1 867 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SPDYCQ5MJ68 293 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 MORN1Q5T089 497 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 NT5DC1Q5TFE4 455 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 GKAP1Q5VSY0 366 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 RUFY4Q6ZNE9 571 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 MAATS1Q7Z4T9 603 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 GPR142Q7Z601 462 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 CROCCP2Q86T23 111 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SIAH1Q8IUQ4 282 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 FAM114A1Q8IWE2 563 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 LRRC43Q8N309 656 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SLC35F6Q8N357 371 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 TRPV1Q8NER1 839 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 NPLOC4Q8TAT6 608 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 WHAMMQ8TF30 809 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 C17orf50Q8WW18 174 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SREK1Q8WXA9 508 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 CYFIP2Q96F07 1278 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 LRCH3Q96II8 777 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 PAWRQ96IZ0 340 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 MAML3Q96JK9 1138 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ATP6V1G3Q96LB4 118 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 C12orf42Q96LP6 360 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 IRX2Q9BZI1 471 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 TSGA10Q9BZW7 698 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 EHD4Q9H223 541 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 DHX36Q9H2U1 1008 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 BOLA2Q9H3K6 86 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ZWILCHQ9H900 591 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 MRPL44Q9H9J2 332 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 SUGCTQ9HAC7 445 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 DMAP1Q9NPF5 467 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 LUC7LQ9NQ29 371 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 TRPV5Q9NQA5 729 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SLC5A4Q9NY91 659 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 LMCD1Q9NZU5 365 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 EGFL7Q9UHF1 273 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SERPINB13Q9UIV8 391 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ZMYND8Q9ULU4 1186 aaPredicted RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 PCDHA7Q9UN72 937 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 PHF24Q9UPV7 400 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 ASB3Q9Y575 518 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSX9-202ENST00000608568 RBM8AQ9Y5S9 174 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 PRRC2BQ5JSZ5 2229 aaKnown RBP5.53□□□□□ -1.52
SSX9-202ENST00000608568 KIAA1671Q9BY89 1806 aa5.53□□□□□ -1.52
SSX9-202ENST00000608568 MAGEB6P1A0A0J9YX57 407 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 SPTLC2O15270 562 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 ASAP2O43150 1006 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 TRAPPC3O43617 180 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 KRT86O43790 486 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 CEP104O60308 925 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 MFAP3LO75121 409 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 E2F6O75461 281 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 ANP32DO95626 131 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 HLA-DOAP06340 250 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 IFIT2P09913 472 aaKnown RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 PDHBP11177 359 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 SYN1P17600 705 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 TPP2P29144 1249 aaPredicted RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 ADD2P35612 726 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 SKIV2L2P42285 1042 aaKnown RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 UBXN2AP68543 259 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 LSM11P83369 360 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSX9-202ENST00000608568 CACNB2Q08289 660 aaPredicted RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 KIF5AQ12840 1032 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 PAK2Q13177 524 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 STK38Q15208 465 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 IMMTQ16891 758 aaKnown RBP5.52□□□□□ -1.53
SSX9-202ENST00000608568 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 MAP7D1Q3KQU3 841 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 ADCK5Q3MIX3 580 aa5.52□□□□□ -1.53
SSX9-202ENST00000608568 USH1GQ495M9 461 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms