RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 CATSPER3Q86XQ3 398 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 C4orf32Q8N8J7 132 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 NEK9Q8TD19 979 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 PSPC1Q8WXF1 523 aaKnown RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 MTRQ99707 1265 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 JPH2Q9BR39 696 aaPredicted RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 C11orf84Q9BUA3 381 aaPredicted RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 ATP6V0A4Q9HBG4 840 aa13.72□□□□□ -0.21
CTSA-210ENST00000606000 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 PIN4Q9Y237 131 aaKnown RBP13.72□□□□□ -0.21
CTSA-210ENST00000606000 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 MEIS3P2A8K0S8 358 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 ITGB1P05556 798 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTSA-210ENST00000606000 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 CAMK1Q14012 370 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 CLLU1OSQ5K130 101 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 MAEAQ7L5Y9 396 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 ASAP3Q8TDY4 903 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 LPPQ93052 612 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 CASD1Q96PB1 797 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 CWH43Q9H720 699 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
CTSA-210ENST00000606000 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 RWDD3Q9Y3V2 267 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
CTSA-210ENST00000606000 PP2D1A8MPX8 630 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 RB1P06400 928 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.226e-6■■■■□ 21.5
CTSA-210ENST00000606000 IRS1P35568 1242 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 PBX3P40426 434 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 CAPSQ13938 189 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 IL17AQ16552 155 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 ECM1Q16610 540 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 PTPROQ16827 1216 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 TIGD5Q53EQ6 642 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
CTSA-210ENST00000606000 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
CTSA-210ENST00000606000 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 RNF149Q8NC42 400 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 HLA-CQ95604 372 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 GPRC5CQ9NQ84 441 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 ANKEF1Q9NU02 776 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 PPME1Q9Y570 386 aa13.7□□□□□ -0.22
CTSA-210ENST00000606000 A0A0U1RQF3 1178 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 PHKA2P46019 1235 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 MCM2P49736 904 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 PTGDRQ13258 359 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 ADGRD2Q7Z7M1 963 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 SPPL3Q8TCT6 385 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 ADAMTS19Q8TE59 1207 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 POF1BQ8WVV4 589 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 TCP11Q8WWU5 503 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 PLVAPQ9BX97 442 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 POLR3FQ9H1D9 316 aaPredicted RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 UBE2ZQ9H832 354 aaPredicted RBP13.69□□□□□ -0.22
CTSA-210ENST00000606000 TUFT1Q9NNX1 390 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 AGPAT5Q9NUQ2 364 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 SMC3Q9UQE7 1217 aa13.69□□□□□ -0.22
CTSA-210ENST00000606000 GAS2O43903 313 aaKnown RBP13.68□□□□□ -0.22
CTSA-210ENST00000606000 DGAT1O75907 488 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 BMP1P13497 986 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 GLRA2P23416 452 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 RPA1P27694 616 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 ARL2P36404 184 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTSA-210ENST00000606000 CDC42EP1Q00587 391 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 UBXN11Q5T124 520 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 P2RX5Q93086 422 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 CPB2Q96IY4 423 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 POLR3CQ9BUI4 534 aaPredicted RBP13.68□□□□□ -0.22
CTSA-210ENST00000606000 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
CTSA-210ENST00000606000 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
CTSA-210ENST00000606000 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 COG5Q9UP83 839 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
CTSA-210ENST00000606000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.67□□□□□ -0.22
CTSA-210ENST00000606000 H3BQ06 376 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms