RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 WASH4PA8MWX3 477 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 NDUFAB1O14561 156 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MAFGO15525 162 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPIP5K2O43314 1243 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MAP4K4O95819 1239 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 BPNT1O95861 308 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 LDHBP07195 334 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 SRFP11831 508 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ALADP13716 330 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CPA1P15085 419 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CD151P48509 253 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 SARSP49591 514 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 NDUFA8P51970 172 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 YARSP54577 528 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 DLG4P78352 724 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 BLMHQ13867 455 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZNF268Q14587 947 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 PTGISQ16647 500 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZNF569Q5MCW4 686 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CWF19L1Q69YN2 538 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 IQCEQ6IPM2 695 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 OLFM4Q6UX06 510 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 TOGARAM2Q6ZUX3 1019 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 TMEM151BQ8IW70 566 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC13Q8IYE1 715 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MREGQ8N565 214 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ARFGAP2Q8N6H7 521 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 NSUN7Q8NE18 718 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 FAM13CQ8NE31 585 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 BAHD1Q8TBE0 780 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZNF473Q8WTR7 871 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPP1R13LQ8WUF5 828 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 LMBR1Q8WVP7 490 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 DTNBP1Q96EV8 351 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 BICD1Q96G01 975 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCT8L2Q96SF2 557 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MCOLN1Q9GZU1 580 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ASCC2Q9H1I8 757 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 HAUS4Q9H6D7 363 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MRPL44Q9H9J2 332 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ECHDC1Q9NTX5 307 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 INTS13Q9NVM9 706 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 RGL1Q9NZL6 768 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 PUF60Q9UHX1 559 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 CRB1P82279 1406 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ERCC6L2Q5T890 1561 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 RFX7Q2KHR2 1363 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ABCC1P33527 1531 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 ATP7AQ04656 1500 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MROH2AA6NES4 1674 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 SETD1BQ9UPS6 1966 aaKnown RBP4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 MYH8P13535 1937 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 PIK3C2BO00750 1634 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CEP170BQ9Y4F5 1589 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANO9A1A5B4 782 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CFAP73A6NFT4 308 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPTLC2O15270 562 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CDKL5O76039 1030 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 PAEPP09466 180 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZGLP1P0C6A0 271 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 RHOXF2BP0C7M4 288 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ATP1A3P13637 1013 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SYN1P17600 705 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CNGA1P29973 690 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 GBP2P32456 591 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 LSP1P33241 339 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 GCKP35557 465 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 MDH1P40925 334 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ME1P48163 572 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 EXOSC10Q01780 885 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRIM14Q14142 442 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC39A14Q15043 492 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 TSNAXIP1Q2TAA8 658 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC57Q2TAC2 916 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 NAA35Q5VZE5 725 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CAPRIN2Q6IMN6 1127 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC70Q6NSX1 233 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 RAD9BQ6WBX8 426 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 WAPLQ7Z5K2 1190 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 TSPYL5Q86VY4 417 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 NLRP14Q86W24 1093 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CNGA4Q8IV77 575 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC35F6Q8N357 371 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 GALNT15Q8N3T1 639 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 NOA1Q8NC60 698 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPATA20Q8TB22 786 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CUL5Q93034 780 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CENPTQ96BT3 561 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPDL1Q96EA4 605 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 GPATCH3Q96I76 525 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC114Q96M63 670 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ASB16Q96NS5 453 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 NEK1Q96PY6 1258 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 ALS2CR12Q96Q35 445 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SPAG5Q96R06 1193 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CTAGE1Q96RT6 745 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 RHOXF2Q9BQY4 288 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SELENOOQ9BVL4 669 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SUDS3Q9H7L9 328 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms