RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CHST12Q9NRB3 414 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 DACT1Q9NYF0 836 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 LRFN2Q9ULH4 789 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 WDR81Q562E7 1941 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 GTPBP6O43824 516 aaPredicted RBP21.39■■□□□ 1.02
SRSF4-206ENST00000605204 POU5F1BQ06416 359 aa21.39■■□□□ 1.02
SRSF4-206ENST00000605204 SRGAP1Q7Z6B7 1085 aa21.39■■□□□ 1.02
SRSF4-206ENST00000605204 RTN4RL1Q86UN2 441 aaPredicted RBP21.39■■□□□ 1.02
SRSF4-206ENST00000605204 CMTR2Q8IYT2 770 aaKnown RBP21.39■■□□□ 1.02
SRSF4-206ENST00000605204 FIBCD1Q8N539 461 aa21.39■■□□□ 1.02
SRSF4-206ENST00000605204 ZNF579Q8NAF0 562 aaKnown RBP21.39■■□□□ 1.02
SRSF4-206ENST00000605204 NLRP4Q96MN2 994 aa21.39■■□□□ 1.02
SRSF4-206ENST00000605204 PCDHB7Q9Y5E2 793 aa21.39■■□□□ 1.02
SRSF4-206ENST00000605204 A0A087WZ62 844 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 VPS37CA5D8V6 355 aaPredicted RBP21.38■■□□□ 1.01
SRSF4-206ENST00000605204 C9IYK1 514 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 HOXA2O43364 376 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 MED24O75448 989 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 KCNQ1P51787 676 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 TFDP1Q14186 410 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 DSC3Q14574 896 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 KRT79Q5XKE5 535 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 FERMT3Q86UX7 667 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 PRPF31Q8WWY3 499 aaKnown RBP21.38■■□□□ 1.01
SRSF4-206ENST00000605204 ZNF689Q96CS4 500 aaPredicted RBP21.38■■□□□ 1.01
SRSF4-206ENST00000605204 FDXACB1Q9BRP7 624 aaPredicted RBP21.38■■□□□ 1.01
SRSF4-206ENST00000605204 TMEM161AQ9NX61 479 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 LMCD1Q9NZU5 365 aa21.38■■□□□ 1.01
SRSF4-206ENST00000605204 CCT6AP40227 531 aaKnown RBP21.37■■□□□ 1.01
SRSF4-206ENST00000605204 PHKA2P46019 1235 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 LAMTOR4Q0VGL1 99 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 BTG3Q14201 252 aaPredicted RBP21.37■■□□□ 1.01
SRSF4-206ENST00000605204 PIGOQ8TEQ8 1089 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 TMEM143Q96AN5 459 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 TRAIPQ9BWF2 469 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 MTCH2Q9Y6C9 303 aa21.37■■□□□ 1.01
SRSF4-206ENST00000605204 ZBTB39O15060 712 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 SLC26A4O43511 780 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 MGEA5O60502 916 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 SKIP12755 728 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 COL9A1P20849 921 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 FAM189BP81408 668 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 POTEGQ6S5H5 508 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 SNX29Q8TEQ0 813 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 CLP1Q92989 425 aaKnown RBP21.36■■□□□ 1.01
SRSF4-206ENST00000605204 AK8Q96MA6 479 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 NFKBIZQ9BYH8 718 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 IFT122Q9HBG6 1241 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 XPNPEP1Q9NQW7 623 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 BRWD1Q9NSI6 2320 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 ARHGEF35A5YM69 484 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 RB1P06400 928 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 SYT1P21579 422 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 FBXO22Q8NEZ5 403 aa21.36■■□□□ 1.01
SRSF4-206ENST00000605204 DAXXQ9UER7 740 aaPredicted RBP21.36■■□□□ 1.01
SRSF4-206ENST00000605204 A0A0U1RQF3 1178 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 C5orf67F2Z3F1 127 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 ARL2P36404 184 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 RAB27AP51159 221 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 CATSPER4Q7RTX7 472 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 IFNLR1Q8IU57 520 aaPredicted RBP21.35■■□□□ 1.01
SRSF4-206ENST00000605204 RNF149Q8NC42 400 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 ZNF668Q96K58 619 aaPredicted RBP21.35■■□□□ 1.01
SRSF4-206ENST00000605204 PLVAPQ9BX97 442 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 TTC3P53804 2025 aa21.35■■□□□ 1.01
SRSF4-206ENST00000605204 EVPLQ92817 2033 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 USO1O60763 962 aaKnown RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 EOMESO95936 686 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 SRGAP2CP0DJJ0 459 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 BMP1P13497 986 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 NCBP1Q09161 790 aaKnown RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 GRB10Q13322 594 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 PTPROQ16827 1216 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 EPC2Q52LR7 807 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 KSR1Q8IVT5 923 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 TMEM192Q8IY95 271 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 C11orf84Q9BUA3 381 aaPredicted RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 NT5C3AQ9H0P0 336 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 ZSCAN16Q9H4T2 348 aaPredicted RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 BMP2KQ9NSY1 1161 aaPredicted RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 AGPAT5Q9NUQ2 364 aa21.34■■□□□ 1.01
SRSF4-206ENST00000605204 PIN4Q9Y237 131 aaKnown RBP21.34■■□□□ 1.01
SRSF4-206ENST00000605204 LPXNO60711 386 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 CYP11B2P19099 503 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 AXLP30530 894 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 PTENP60484 403 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 SKIV2LQ15477 1246 aaKnown RBP21.33■■□□□ 1
SRSF4-206ENST00000605204 NAALADL2Q58DX5 795 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 PADI6Q6TGC4 694 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 CCDC51Q96ER9 411 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 C17orf80Q9BSJ5 609 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 MTUS1Q9ULD2 1270 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 KIAA1024Q9UPX6 916 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 DNM3Q9UQ16 869 aa21.33■■□□□ 1
SRSF4-206ENST00000605204 ERLIN2O94905 339 aa21.32■■□□□ 1
SRSF4-206ENST00000605204 CTNNB1P35222 781 aa21.32■■□□□ 1
SRSF4-206ENST00000605204 BMPR1AP36894 532 aa21.32■■□□□ 1
SRSF4-206ENST00000605204 HYIQ5T013 277 aa21.32■■□□□ 1
SRSF4-206ENST00000605204 TWF2Q6IBS0 349 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms