RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 CD52P31358 61 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 RAD51AP2Q09MP3 1159 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 PAK2Q13177 524 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 CAPSQ13938 189 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 TFDP1Q14186 410 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 GPBP1Q86WP2 473 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 DHX58Q96C10 678 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 KCNH3Q9ULD8 1083 aa17.25■□□□□ 0.35
CDCA3-211ENST00000603043 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
CDCA3-211ENST00000603043 LAMA3Q16787 3333 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 A0A1W2PQ27 194 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 A0A1W2PQ64 194 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 A0A1W2PQD8 194 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 PFKFB1P16118 471 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 SHHQ15465 462 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 E2F4Q16254 413 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 ARSHQ5FYA8 562 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 APBB2Q92870 758 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 PYM1Q9BRP8 204 aaKnown RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 COLQQ9Y215 455 aaPredicted RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 TRIOBPQ9H2D6 2365 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 LAMA2P24043 3122 aaKnown RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 TCTN1Q2MV58 587 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 SV2BQ7L1I2 683 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
CDCA3-211ENST00000603043 CUEDC2Q9H467 287 aa17.24■□□□□ 0.35
CDCA3-211ENST00000603043 NPHP3-ACAD11A0A0J9YXS1 232 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 GPR182O15218 404 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
CDCA3-211ENST00000603043 BAIAP3O94812 1187 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 PHKA2P46019 1235 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 IKBKEQ14164 716 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 PPP2R5AQ15172 486 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 ODR4Q5SWX8 454 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 FAM228AQ86W67 206 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 DAW1Q8N136 415 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 BSNDQ8WZ55 320 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 HERVK_113Q902F9 699 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CDCA3-211ENST00000603043 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 IFT74Q96LB3 600 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 MTIF3Q9H2K0 278 aaKnown RBP17.23■□□□□ 0.35
CDCA3-211ENST00000603043 ST3GAL5Q9UNP4 418 aa17.23■□□□□ 0.35
CDCA3-211ENST00000603043 LRRIQ4A6NIV6 560 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 ZBBXA8MT70 800 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
CDCA3-211ENST00000603043 PTENP60484 403 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-211ENST00000603043 POU5F1BQ06416 359 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 MAPK7Q13164 816 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 ERVK-5Q9HDB9 667 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 CXXC1Q9P0U4 656 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-211ENST00000603043 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDCA3-211ENST00000603043 NAMPTP43490 491 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
CDCA3-211ENST00000603043 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
CDCA3-211ENST00000603043 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 EFCAB14O75071 495 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 FGFR4P22455 802 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 NDUFA8P51970 172 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 GIT2Q14161 759 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
CDCA3-211ENST00000603043 FTHL17Q9BXU8 183 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 MINDY3Q9H8M7 445 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 MAGEF1Q9HAY2 307 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
CDCA3-211ENST00000603043 A0A1W2PPC1 479 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 MYMKA6NI61 221 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 SYKP43405 635 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 PEX3P56589 373 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 RASIP1Q5U651 963 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 CDCA2Q69YH5 1023 aaPredicted RBP17.2■□□□□ 0.34
CDCA3-211ENST00000603043 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 DDX12PQ92771 950 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
CDCA3-211ENST00000603043 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms