RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SLC7A3Q8WY07 619 aa19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 TUT1Q9H6E5 874 aaKnown RBP19.08■□□□□ 0.65
PPFIA3-207ENST00000602716 TISP43B9A030 160 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 MAFO75444 373 aaPredicted RBP19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 GJB1P08034 283 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 GLRA2P23416 452 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 PPP1R2P41236 205 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 SLC26A2P50443 739 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 NCKAP1LP55160 1127 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 TBC1D8BQ0IIM8 1120 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 ZNF592Q92610 1267 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 KIFAP3Q92845 792 aa19.08■□□□□ 0.64
PPFIA3-207ENST00000602716 BICDL2A1A5D9 508 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 EIF3DO15371 548 aaKnown RBP eCLIP19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 TGFB1I1O43294 461 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 HBP1O60381 514 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 C22orf31O95567 290 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 PGK1P00558 417 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 RFC5P40937 340 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 CHMP4BP1P59074 171 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 KNOP1Q1ED39 458 aaKnown RBP19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 TMEM161BQ8NDZ6 487 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 ERO1AQ96HE7 468 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 TRMT1Q9NXH9 659 aaKnown RBP19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 BRCA2P51587 3418 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 CCDC169A6NNP5 214 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 F2P00734 622 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 ARL2P36404 184 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 CLCN3P51790 818 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 RAET1EQ8TD07 263 aa19.07■□□□□ 0.64
PPFIA3-207ENST00000602716 MYH11P35749 1972 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 IGKV6-21A0A0C4DH24 114 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 KCNJ18B7U540 433 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 KCNJ6P48051 423 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 C1QTNF8P60827 252 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 LRRC63Q05C16 580 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 DMP1Q13316 513 aaPredicted RBP19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 KCNJ12Q14500 433 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 KRT31Q15323 416 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 FSCN1Q16658 493 aaKnown RBP19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 TAS1R3Q7RTX0 852 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 ZNF668Q96K58 619 aaPredicted RBP19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 AP5M1Q9H0R1 490 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 SUGCTQ9HAC7 445 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 TAB2Q9NYJ8 693 aa19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 ZNF215Q9UL58 517 aaPredicted RBP19.06■□□□□ 0.64
PPFIA3-207ENST00000602716 SEPT4O43236 478 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 DUSP11O75319 330 aaKnown RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 SERPINC1P01008 464 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 HMGCRP04035 888 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 MYL3P08590 195 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 CAPSQ13938 189 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 HIC1Q14526 733 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 MAP3K21Q5TCX8 1036 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 CNOT6LQ96LI5 555 aaKnown RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 THAP9Q9H5L6 903 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 KMT5AQ9NQR1 393 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 PTCH2Q9Y6C5 1203 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 KIF2AO00139 706 aaPredicted RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 CLIC2O15247 247 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 C6orf222P0C671 652 aaPredicted RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 CDK11BP21127 795 aaKnown RBP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 SFPQP23246 707 aaKnown RBP eCLIP19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 TCP11X2Q5H9J9 407 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 CREBRFQ8IUR6 639 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 USP20Q9Y2K6 914 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 Q9Y3F1 56 aa19.05■□□□□ 0.64
PPFIA3-207ENST00000602716 UBE4BO95155 1302 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 DENND3A2RUS2 1198 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 EDN1P05305 212 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 HOXD10P28358 340 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 RTP1P59025 263 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 GTF2BQ00403 316 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 KIAA0753Q2KHM9 967 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 MARCH8Q5T0T0 291 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 ZC3H3Q8IXZ2 948 aaKnown RBP19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 SPIRE2Q8WWL2 714 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 TSG101Q99816 390 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 TYW1Q9NV66 732 aaKnown RBP19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 TRAF3IP3Q9Y228 551 aa19.04■□□□□ 0.64
PPFIA3-207ENST00000602716 ADAMTS4O75173 837 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 MAPTP10636 758 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 CPT1AP50416 773 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 UBASH3AP57075 661 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 GJA9P57773 515 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 NAA30Q147X3 362 aaPredicted RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 GRIK4Q16099 956 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PRPF31Q8WWY3 499 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 UPF3AQ9H1J1 476 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 ST6GALNAC4Q9H4F1 302 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 SETD4Q9NVD3 440 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 ARHGAP28Q9P2N2 729 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 TRIM17Q9Y577 477 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 LRRIQ4A6NIV6 560 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 TEX33O43247 280 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 KIF20AO95235 890 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 INHAP05111 366 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms