RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	ECHDC2	Q86YB7	292 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TCP11	Q8WWU5	503 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	PSPC1	Q8WXF1	523 aa	Known RBP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TMEM143	Q96AN5	459 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TMX3	Q96JJ7	454 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	NLRP4	Q96MN2	994 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	NSUN3	Q9H649	340 aa	Known RBP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	IFT122	Q9HBG6	1241 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	CHST12	Q9NRB3	414 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	ANKEF1	Q9NU02	776 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	RNF19A	Q9NV58	838 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	DACT1	Q9NYF0	836 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	PLAGL2	Q9UPG8	496 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223		A0A0U1RQF3	1178 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	HOXA2	O43364	376 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ITGB1	P05556	798 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	OR52Z1	P0C646	297 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	KCNQ1	P51787	676 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	GNL2	Q13823	731 aa	Known RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ZNF174	Q15697	407 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	TCEAL5	Q5H9L2	206 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ZNF598	Q86UK7	904 aa	Known RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	KLHL23	Q8NBE8	558 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ADAMTS19	Q8TE59	1207 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	PRPF31	Q8WWY3	499 aa	Known RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	MTR	Q99707	1265 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	TRAIP	Q9BWF2	469 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	TMEM117	Q9H0C3	514 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	UBE2Z	Q9H832	354 aa	Predicted RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ALG13	Q9NP73	1137 aa	Known RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	XPNPEP1	Q9NQW7	623 aa		13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	NOL7	Q9UMY1	257 aa	Known RBP	13.84	□□□□□ -0.19
STRN4-223	ENST00000602223	ASAP2	O43150	1006 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	EOMES	O95936	686 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	SPATA31C1	P0DKV0	1188 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	XRCC6	P12956	609 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	ATF7	P17544	494 aa	Predicted RBP	13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	MCM2	P49736	904 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	RARRES1	P49788	294 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	LAMTOR4	Q0VGL1	99 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	CAMK1	Q14012	370 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	COL19A1	Q14993	1142 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	SRGAP1	Q7Z6B7	1085 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	FERMT3	Q86UX7	667 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	SPPL3	Q8TCT6	385 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	CASD1	Q96PB1	797 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	CWH43	Q9H720	699 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	TUFT1	Q9NNX1	390 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	AAAS	Q9NRG9	546 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	TYW1	Q9NV66	732 aa	Known RBP	13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	HCST	Q9UBK5	93 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	KIF3A	Q9Y496	699 aa		13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	TDRD15	B5MCY1	1934 aa	Known RBP	13.83	□□□□□ -0.2
STRN4-223	ENST00000602223	MED24	O75448	989 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	DGAT1	O75907	488 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	SRGAP2C	P0DJJ0	459 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	DNAJB1	P25685	340 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	TEC	P42680	631 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	PHKA2	P46019	1235 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	TOB1	P50616	345 aa	Predicted RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	NBR1	Q14596	966 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	CLLU1OS	Q5K130	101 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	SPOUT1	Q5T280	376 aa	Known RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	LRRC55	Q6ZSA7	311 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	CATSPER4	Q7RTX7	472 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	CATSPER3	Q86XQ3	398 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	ABI1	Q8IZP0	508 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	C4orf32	Q8N8J7	132 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	COLGALT1	Q8NBJ5	622 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	PIGO	Q8TEQ8	1089 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	POF1B	Q8WVV4	589 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	PABPC5	Q96DU9	382 aa	Known RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	UHRF1	Q96T88	793 aa	Predicted RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	MINDY3	Q9H8M7	445 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	AGPAT5	Q9NUQ2	364 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	PIN4	Q9Y237	131 aa	Known RBP	13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	PCDHB12	Q9Y5F1	795 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	MYH11	P35749	1972 aa		13.82	□□□□□ -0.2
STRN4-223	ENST00000602223	SKI	P12755	728 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	LAG3	P18627	525 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	RPA1	P27694	616 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	FXR2	P51116	673 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	2e-6	■□□□□ 9.9
STRN4-223	ENST00000602223	UBE3A	Q05086	875 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	MXD4	Q14582	209 aa	Predicted RBP	13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	CSPP1	Q1MSJ5	1256 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	LEXM	Q3ZCV2	418 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	TWF2	Q6IBS0	349 aa	Known RBP	13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	LRRC43	Q8N309	656 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	RNF149	Q8NC42	400 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	RNF169	Q8NCN4	708 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	CCDC43	Q96MW1	224 aa	Known RBP	13.81	□□□□□ -0.2
STRN4-223	ENST00000602223	FAM105A	Q9NUU6	356 aa		13.81	□□□□□ -0.2
STRN4-223	ENST00000602223		A0A087WWV3	80 aa		13.8	□□□□□ -0.2
STRN4-223	ENST00000602223	TNFRSF10A	O00220	468 aa		13.8	□□□□□ -0.2
STRN4-223	ENST00000602223	NCK2	O43639	380 aa		13.8	□□□□□ -0.2
STRN4-223	ENST00000602223	ZNF623	O75123	536 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms