RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZNF598Q86UK7 904 aaKnown RBP14.79□□□□□ -0.04
RPS28-204ENST00000602140 EDAQ92838 391 aa14.79□□□□□ -0.04
RPS28-204ENST00000602140 PHF7Q9BWX1 381 aaPredicted RBP14.79□□□□□ -0.04
RPS28-204ENST00000602140 NGRNQ9NPE2 291 aaKnown RBP14.79□□□□□ -0.04
RPS28-204ENST00000602140 PDRG1Q9NUG6 133 aa14.79□□□□□ -0.04
RPS28-204ENST00000602140 DACT1Q9NYF0 836 aa14.79□□□□□ -0.04
RPS28-204ENST00000602140 SPG21Q9NZD8 308 aa14.79□□□□□ -0.04
RPS28-204ENST00000602140 DDX25Q9UHL0 483 aaKnown RBP14.79□□□□□ -0.04
RPS28-204ENST00000602140 KCNJ14Q9UNX9 436 aa14.79□□□□□ -0.04
RPS28-204ENST00000602140 A0A087WZ62 844 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 IGKV6-21A0A0C4DH24 114 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 SLC37A4O43826 429 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 SRGAP2BP0DMP2 458 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 TECP42680 631 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 KCNC3Q14003 757 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
RPS28-204ENST00000602140 LETM2Q2VYF4 491 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 LLGL2Q6P1M3 1020 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 TMEM184AQ6ZMB5 413 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 RHPN2Q8IUC4 686 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 FAM177A1Q8N128 213 aaPredicted RBP14.78□□□□□ -0.04
RPS28-204ENST00000602140 SUSD6Q92537 303 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 RPGRIP1Q96KN7 1286 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 FDXACB1Q9BRP7 624 aaPredicted RBP14.78□□□□□ -0.04
RPS28-204ENST00000602140 CHST12Q9NRB3 414 aa14.78□□□□□ -0.04
RPS28-204ENST00000602140 SUCLA2Q9P2R7 463 aaPredicted RBP14.78□□□□□ -0.04
RPS28-204ENST00000602140 EML1O00423 815 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 MAFO75444 373 aaPredicted RBP14.77□□□□□ -0.05
RPS28-204ENST00000602140 SFPQP23246 707 aaKnown RBP eCLIP14.77□□□□□ -0.05
RPS28-204ENST00000602140 PHKA2P46019 1235 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 PSMC5P62195 406 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 PLA2G4FQ68DD2 849 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 TWF2Q6IBS0 349 aaKnown RBP14.77□□□□□ -0.05
RPS28-204ENST00000602140 ANKRD54Q6NXT1 300 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 ANO5Q75V66 913 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 ZNF410Q86VK4 478 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 KSR1Q8IVT5 923 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 APOL5Q9BWW9 433 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 MRPL9Q9BYD2 267 aaKnown RBP14.77□□□□□ -0.05
RPS28-204ENST00000602140 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.05
RPS28-204ENST00000602140 S1PR5Q9H228 398 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 WDFY4Q6ZS81 3184 aa14.77□□□□□ -0.05
RPS28-204ENST00000602140 MUC6Q6W4X9 2439 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 CCDC194A0A1B0GVG4 234 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 NT5C1B-RDH14C9J2C7 533 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 DTNBO60941 627 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 ALDH7A1P49419 539 aaKnown RBP14.76□□□□□ -0.05
RPS28-204ENST00000602140 BCAR1P56945 870 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 SCRN1Q12765 414 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 SMC1AQ14683 1233 aaKnown RBP14.76□□□□□ -0.05
RPS28-204ENST00000602140 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 SYCE2Q6PIF2 218 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 MRPL43Q8N983 215 aaKnown RBP14.76□□□□□ -0.05
RPS28-204ENST00000602140 LPPQ93052 612 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 FBXL18Q96ME1 805 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 NLRP4Q96MN2 994 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 PHF20Q9BVI0 1012 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 SLKQ9H2G2 1235 aaPredicted RBP14.76□□□□□ -0.05
RPS28-204ENST00000602140 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 GJB4Q9NTQ9 266 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 VAV3Q9UKW4 847 aa14.76□□□□□ -0.05
RPS28-204ENST00000602140 PIN4Q9Y237 131 aaKnown RBP14.76□□□□□ -0.05
RPS28-204ENST00000602140 CDKL5O76039 1030 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 HOXB8P17481 243 aaPredicted RBP14.75□□□□□ -0.05
RPS28-204ENST00000602140 CA8P35219 290 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 QARSP47897 775 aaKnown RBP14.75□□□□□ -0.05
RPS28-204ENST00000602140 NPEPPSP55786 919 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 ZXDAP98168 799 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 PPP2R5CQ13362 524 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 PPP4R3AQ6IN85 833 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 TRIM67Q6ZTA4 783 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 CATSPER4Q7RTX7 472 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 FAM20AQ96MK3 541 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 JPH2Q9BR39 696 aaPredicted RBP14.75□□□□□ -0.05
RPS28-204ENST00000602140 TRAIPQ9BWF2 469 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 KCNH6Q9H252 994 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 KCNMB3Q9NPA1 279 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 FAM105AQ9NUU6 356 aa14.75□□□□□ -0.05
RPS28-204ENST00000602140 TMEM221A6NGB7 291 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 C2orf71A6NGG8 1288 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 M0R296 226 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 CCNT1O60563 726 aaKnown RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 DKC1O60832 514 aaKnown RBP eCLIP14.74□□□□□ -0.05
RPS28-204ENST00000602140 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
RPS28-204ENST00000602140 CXCL14O95715 111 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 P4HBP07237 508 aaKnown RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 SKIP12755 728 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 GCFC2P16383 781 aaKnown RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 XBP1P17861 261 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 GLB1LQ6UWU2 654 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 PIK3AP1Q6ZUJ8 805 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 BMP8AQ7Z5Y6 402 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 ALYREFQ86V81 257 aaKnown RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 VPS52Q8N1B4 723 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 ZNF579Q8NAF0 562 aaKnown RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 OXER1Q8TDS5 423 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms