RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LRRC71Q8N4P6 559 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 TBCKQ8TEA7 893 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 CASP10Q92851 521 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 NECTIN4Q96NY8 510 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 APOL5Q9BWW9 433 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 ZSWIM6Q9HCJ5 1215 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 PPME1Q9Y570 386 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 IGKV6-21A0A0C4DH24 114 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 SMC1AQ14683 1233 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 ZNF598Q86UK7 904 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 MRPL43Q8N983 215 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 DAGLBQ8NCG7 672 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 S1PR5Q9H228 398 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 UNC45AQ9H3U1 944 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 RNF19AQ9NV58 838 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 CYP46A1Q9Y6A2 500 aa20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 FNDC1Q4ZHG4 1894 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-227ENST00000602011 ADAMTS3O15072 1205 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 EDIL3O43854 480 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 SP100P23497 879 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 TECP42680 631 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 CCT2P78371 535 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 ITIH3Q06033 890 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 SIGLEC14Q08ET2 396 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 PLPP4Q5VZY2 271 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 CES5AQ6NT32 575 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 B3GNT9Q6UX72 402 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 SUGP1Q8IWZ8 645 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 BLIDQ8IZY5 108 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 MBOAT7Q96N66 472 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 IRF2BPLQ9H1B7 796 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 FAM86C1Q9NVL1 165 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 NR2E1Q9Y466 385 aa20.03■□□□□ 0.8
SHKBP1-227ENST00000602011 CHMP2AO43633 222 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 ZNF623O75123 536 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 RAB27AP51159 221 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 POLGP54098 1239 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 VCPP55072 806 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 PSMC5P62195 406 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 TCF15Q12870 199 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 SLC39A11Q8N1S5 342 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 TMEM169Q96HH4 297 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 FAM20AQ96MK3 541 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 NAP1L4Q99733 375 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 CDH22Q9UJ99 828 aa20.02■□□□□ 0.8
SHKBP1-227ENST00000602011 MAFO75444 373 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 XBP1P17861 261 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 NUBP1P53384 320 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 NONOQ15233 471 aaKnown RBP eCLIP20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 CLLU1OSQ5K130 101 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 SYCE2Q6PIF2 218 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 KRT25Q7Z3Z0 450 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 TMEM87AQ8NBN3 555 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 RNF169Q8NCN4 708 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 PGBD4Q96DM1 585 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 SEPT9Q9UHD8 586 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 IRAK3Q9Y616 596 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 USP34Q70CQ2 3546 aa20.01■□□□□ 0.79
SHKBP1-227ENST00000602011 M0R2N6 131 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 CDKL5O76039 1030 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 PHKA2P46019 1235 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 PTPN5P54829 565 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 UGCGQ16739 394 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 MTERF2Q49AM1 385 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 LLGL2Q6P1M3 1020 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 GLB1LQ6UWU2 654 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 SKAP1Q86WV1 359 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 FBXL6Q8N531 539 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 CEP89Q96ST8 783 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 ADAM7Q9H2U9 754 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 NCOA5Q9HCD5 579 aaKnown RBP20■□□□□ 0.79
SHKBP1-227ENST00000602011 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
SHKBP1-227ENST00000602011 KMT2EQ8IZD2 1858 aa20■□□□□ 0.79
SHKBP1-227ENST00000602011 C2orf71A6NGG8 1288 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 HIDE1A8MVS5 230 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 STBD1O95210 358 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 CXCL14O95715 111 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 GCFC2P16383 781 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 PBX3P40426 434 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 MTHFRP42898 656 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 BCAR1P56945 870 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 TOB2Q14106 344 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 PTPN21Q16825 1174 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 TWF2Q6IBS0 349 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 ASIC4Q96FT7 647 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 DZANK1Q9NVP4 752 aa19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 DDX25Q9UHL0 483 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-227ENST00000602011 A0A087WZ62 844 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 TBX3O15119 743 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 ASAP2O43150 1006 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 GAS2O43903 313 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 PDGFBP01127 241 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 QARSP47897 775 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 PPP2R5CQ13362 524 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms