RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 LONP1P36776 959 aaKnown RBP21.49■■□□□ 1.03
UPF1-212ENST00000601689 POU5F1BQ06416 359 aa21.49■■□□□ 1.03
UPF1-212ENST00000601689 BTG3Q14201 252 aaPredicted RBP21.49■■□□□ 1.03
UPF1-212ENST00000601689 PPP2R5AQ15172 486 aa21.49■■□□□ 1.03
UPF1-212ENST00000601689 FAM102BQ5T8I3 360 aa21.49■■□□□ 1.03
UPF1-212ENST00000601689 KSR1Q8IVT5 923 aa21.49■■□□□ 1.03
UPF1-212ENST00000601689 ZNF396Q96N95 335 aaPredicted RBP21.49■■□□□ 1.03
UPF1-212ENST00000601689 BHMT2Q9H2M3 363 aa21.49■■□□□ 1.03
UPF1-212ENST00000601689 ELAC1Q9H777 363 aaKnown RBP21.49■■□□□ 1.03
UPF1-212ENST00000601689 LINC01553A4QN01 128 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 IGFBP4P22692 258 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 RESTQ13127 1097 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 TWF2Q6IBS0 349 aaKnown RBP21.48■■□□□ 1.03
UPF1-212ENST00000601689 MAEAQ7L5Y9 396 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 RTN4RL1Q86UN2 441 aaPredicted RBP21.48■■□□□ 1.03
UPF1-212ENST00000601689 ZBTB8OSQ8IWT0 167 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 ABI1Q8IZP0 508 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 IFT74Q96LB3 600 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 POLR3FQ9H1D9 316 aaPredicted RBP21.48■■□□□ 1.03
UPF1-212ENST00000601689 CERS4Q9HA82 394 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 PIN4Q9Y237 131 aaKnown RBP21.48■■□□□ 1.03
UPF1-212ENST00000601689 ADGRA3Q8IWK6 1321 aa21.48■■□□□ 1.03
UPF1-212ENST00000601689 A0A087WWV3 80 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 LCHNA4D1U4 455 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 DGKIO75912 1065 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 EYA4O95677 639 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 CYP11B2P19099 503 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 ARL2P36404 184 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 TXLNAP40222 546 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 ERVK-21P61565 698 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 CABP7Q86V35 215 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 SP7Q8TDD2 431 aaPredicted RBP21.47■■□□□ 1.03
UPF1-212ENST00000601689 LINC01599Q8WXQ3 324 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 KIFAP3Q92845 792 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 XPNPEP1Q9NQW7 623 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 TMEM161AQ9NX61 479 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 KCNG1Q9UIX4 513 aa21.47■■□□□ 1.03
UPF1-212ENST00000601689 C9IYK1 514 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 INO80B-WBP1J3KQ70 363 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 EOMESO95936 686 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 FGFR4P22455 802 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 CDC25AP30304 524 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 AXLP30530 894 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 RAB27AP51159 221 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 IL17AQ16552 155 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 CMTR2Q8IYT2 770 aaKnown RBP21.46■■□□□ 1.03
UPF1-212ENST00000601689 SPRYD3Q8NCJ5 442 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 RSPH1Q8WYR4 309 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 TIPINQ9BVW5 301 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 C2orf40Q9H1Z8 148 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 IFT122Q9HBG6 1241 aa21.46■■□□□ 1.03
UPF1-212ENST00000601689 LRRIQ4A6NIV6 560 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 PP2D1A8MPX8 630 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 MGEA5O60502 916 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 CSDE1O75534 798 aaKnown RBP21.45■■□□□ 1.02
UPF1-212ENST00000601689 PTENP60484 403 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
UPF1-212ENST00000601689 DSC3Q14574 896 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 SPOUT1Q5T280 376 aaKnown RBP21.45■■□□□ 1.02
UPF1-212ENST00000601689 FBXO22Q8NEZ5 403 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 NFKBIZQ9BYH8 718 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 AAASQ9NRG9 546 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
UPF1-212ENST00000601689 CCDC39Q9UFE4 941 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 MTUS1Q9ULD2 1270 aa21.45■■□□□ 1.02
UPF1-212ENST00000601689 A0A0U1RQF3 1178 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
UPF1-212ENST00000601689 FAM189BP81408 668 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 STK38Q15208 465 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 HYIQ5T013 277 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 RNF169Q8NCN4 708 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 DEPTORQ8TB45 409 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 ZNF689Q96CS4 500 aaPredicted RBP21.44■■□□□ 1.02
UPF1-212ENST00000601689 PGBD4Q96DM1 585 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 DRC1Q96MC2 740 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 CLIC4Q9Y696 253 aa21.44■■□□□ 1.02
UPF1-212ENST00000601689 RALGAPA2Q2PPJ7 1873 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 NLRC5Q86WI3 1866 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 E9PMD0 336 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 RB1P06400 928 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 GLRA2P23416 452 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 CAPSQ13938 189 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 ECM1Q16610 540 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 PTPROQ16827 1216 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 TMEM132AQ24JP5 1023 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 NOTUMQ6P988 496 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 ECHDC2Q86YB7 292 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 IFNLR1Q8IU57 520 aaPredicted RBP21.43■■□□□ 1.02
UPF1-212ENST00000601689 TMEM192Q8IY95 271 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 HACE1Q8IYU2 909 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 CNNM3Q8NE01 707 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 MAFAQ8NHW3 353 aaPredicted RBP21.43■■□□□ 1.02
UPF1-212ENST00000601689 TRAIPQ9BWF2 469 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 KCND2Q9NZV8 630 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 COL4A6Q14031 1691 aa21.43■■□□□ 1.02
UPF1-212ENST00000601689 TBKBP1A7MCY6 615 aa21.42■■□□□ 1.02
UPF1-212ENST00000601689 ZSCAN22P10073 491 aaPredicted RBP21.42■■□□□ 1.02
UPF1-212ENST00000601689 MARCKSP29966 332 aaPredicted RBP21.42■■□□□ 1.02
UPF1-212ENST00000601689 CTNNB1P35222 781 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms