RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	CHD8	Q9HCK8	2581 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	KRBA1	A5PL33	1030 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	MEIS1	O00470	390 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	SSB	P05455	408 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	CALM1	P0DP23	149 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	CALM2	P0DP24	149 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	CALM3	P0DP25	149 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	SRF	P11831	508 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	RXRA	P19793	462 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	NAPA	P54920	295 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	ANTXR2	P58335	489 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	PTPN14	Q15678	1187 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	EFCAB12	Q6NXP0	572 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	TMEM173	Q86WV6	379 aa	Predicted RBP	13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	TMTC2	Q8N394	836 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	NLRP7	Q8WX94	980 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	RUFY2	Q8WXA3	655 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	RSAD2	Q8WXG1	361 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	SECISBP2L	Q93073	1101 aa	Known RBP	13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	ANO3	Q9BYT9	981 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	RWDD1	Q9H446	243 aa	Predicted RBP	13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	SAMM50	Q9Y512	469 aa		13.91	□□□□□ -0.18
NUP62-223	ENST00000601665	PSAP	P07602	524 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	CLCN4	P51793	760 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	ADCY7	P51828	1080 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	LONRF3	Q496Y0	759 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	DIEXF	Q68CQ4	756 aa	Known RBP	13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	TWF2	Q6IBS0	349 aa	Known RBP	13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	ZNF598	Q86UK7	904 aa	Known RBP	13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	PLA2G4D	Q86XP0	818 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	LRRC71	Q8N4P6	559 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	FEZF2	Q8TBJ5	459 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	NXPE3	Q969Y0	559 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	FAM167A	Q96KS9	214 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	KLHL5	Q96PQ7	755 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	IL25	Q9H293	177 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	ADAMTS10	Q9H324	1103 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	ARHGEF3	Q9NR81	526 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	DPP7	Q9UHL4	492 aa		13.9	□□□□□ -0.18
NUP62-223	ENST00000601665	DENND4A	Q7Z401	1863 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	IPO5	O00410	1097 aa	Known RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	PRC1	O43663	620 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	SKI	P12755	728 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	DARS	P14868	501 aa	Known RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	ATP4A	P20648	1035 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	FGFR4	P22455	802 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	NOMO2	Q5JPE7	1267 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	KIAA0319	Q5VV43	1072 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	PHLDB3	Q6NSJ2	640 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	NIPA1	Q7RTP0	329 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	RAB11FIP4	Q86YS3	637 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	TEX2	Q8IWB9	1127 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	SLC44A3	Q8N4M1	653 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	GPR161	Q8N6U8	529 aa	Known RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	GPR152	Q8TDT2	470 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	ZNF577	Q9BSK1	485 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	PIDD1	Q9HB75	910 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	RIC8A	Q9NPQ8	531 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	MAN1C1	Q9NR34	630 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	MRPL17	Q9NRX2	175 aa	Known RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	TBC1D22B	Q9NU19	505 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	TBC1D13	Q9NVG8	400 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	GABBR1	Q9UBS5	961 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	CDV3	Q9UKY7	258 aa	Known RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	SLC12A7	Q9Y666	1083 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	CLUH	O75153	1309 aa		13.89	□□□□□ -0.19
NUP62-223	ENST00000601665	MAP1B	P46821	2468 aa	Known RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	CCDC195	A0A1B0GUA6	201 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	C2CD2L	O14523	706 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	UROD	P06132	367 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	GALT	P07902	379 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	CNP	P09543	421 aa	Known RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	SFPQ	P23246	707 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	8e-6	■■■■□ 25.1
NUP62-223	ENST00000601665	SREBF1	P36956	1147 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	PHKA2	P46019	1235 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	GPC3	P51654	580 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	PTH1R	Q03431	593 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	AP3B2	Q13367	1082 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	VARS2	Q5ST30	1063 aa	Known RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	PPP1R18	Q6NYC8	613 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	DCLRE1A	Q6PJP8	1040 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	SMC5	Q8IY18	1101 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	CMAS	Q8NFW8	434 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	URGCP	Q8TCY9	931 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	LPP	Q93052	612 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	SHD	Q96IW2	340 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	FAM193B	Q96PV7	902 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	NRDE2	Q9H7Z3	1164 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	WDR6	Q9NNW5	1121 aa	Known RBP	13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	CHST12	Q9NRB3	414 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	EPS15L1	Q9UBC2	864 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	PCDHA10	Q9Y5I2	948 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	TAF6L	Q9Y6J9	622 aa		13.88	□□□□□ -0.19
NUP62-223	ENST00000601665	CHD6	Q8TD26	2715 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms