RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 MTUS1Q9ULD2 1270 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 DNM3Q9UQ16 869 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 E9PMD0 336 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 ASAP2O43150 1006 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
USE1-209ENST00000601592 UBA7P41226 1012 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 PHKA2P46019 1235 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 TAP1Q03518 808 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 GRIN1Q05586 938 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 MXD4Q14582 209 aaPredicted RBP14.22□□□□□ -0.13
USE1-209ENST00000601592 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 ARNTL2Q8WYA1 636 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 USP28Q96RU2 1077 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 CDX2Q99626 313 aaPredicted RBP14.22□□□□□ -0.13
USE1-209ENST00000601592 PRDM12Q9H4Q4 367 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 C1orf112Q9NSG2 853 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
USE1-209ENST00000601592 PCDHB7Q9Y5E2 793 aa14.22□□□□□ -0.13
USE1-209ENST00000601592 LRRIQ4A6NIV6 560 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 ERLIN2O94905 339 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 SLC34A2O95436 690 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 EYA4O95677 639 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 F13A1P00488 732 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 ARL2P36404 184 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 LONP1P36776 959 aaKnown RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 SARSP49591 514 aaKnown RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 HTRA4P83105 476 aaPredicted RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 PKP1Q13835 747 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 CAPSQ13938 189 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 STK38Q15208 465 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 PTPAQ15257 358 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 PAN2Q504Q3 1202 aaKnown RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 TWF2Q6IBS0 349 aaKnown RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 SPRED2Q7Z698 418 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 RNF169Q8NCN4 708 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 AK8Q96MA6 479 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 ZNF396Q96N95 335 aaPredicted RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 GAS2L1Q99501 681 aaPredicted RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 NT5C3AQ9H0P0 336 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 RGS18Q9NS28 235 aa14.21□□□□□ -0.13
USE1-209ENST00000601592 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
USE1-209ENST00000601592 TCHHQ07283 1943 aa14.21□□□□□ -0.14
USE1-209ENST00000601592 ADGRA3Q8IWK6 1321 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 LINC01553A4QN01 128 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 INO80B-WBP1J3KQ70 363 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 FOSL2P15408 326 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 CYP11B2P19099 503 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 GLRA2P23416 452 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 GRB10Q13322 594 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 BTG3Q14201 252 aaPredicted RBP14.2□□□□□ -0.14
USE1-209ENST00000601592 DSC3Q14574 896 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 SPECC1Q5M775 1068 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 SLC24A5Q71RS6 500 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 SRGAP1Q7Z6B7 1085 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 PNMA5Q96PV4 448 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 POLD4Q9HCU8 107 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
USE1-209ENST00000601592 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
USE1-209ENST00000601592 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
USE1-209ENST00000601592 C9IYK1 514 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 IGFBP4P22692 258 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 GATMP50440 423 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 PTENP60484 403 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
USE1-209ENST00000601592 KARSQ15046 597 aaKnown RBP14.19□□□□□ -0.14
USE1-209ENST00000601592 HYIQ5T013 277 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 ZBTB8OSQ8IWT0 167 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 CLIC6Q96NY7 704 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 TGS1Q96RS0 853 aaKnown RBP14.19□□□□□ -0.14
USE1-209ENST00000601592 RUSC1Q9BVN2 902 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 FBXO2Q9UK22 296 aaPredicted RBP14.19□□□□□ -0.14
USE1-209ENST00000601592 COL4A6Q14031 1691 aa14.19□□□□□ -0.14
USE1-209ENST00000601592 RFXAPO00287 272 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 DGKIO75912 1065 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 PLA2G4BP0C869 781 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 LIG1P18858 919 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 PLCG1P19174 1290 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 TXLNAP40222 546 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 RAD51AP2Q09MP3 1159 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 SLC39A14Q15043 492 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 PPP2R5AQ15172 486 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 TMEM132AQ24JP5 1023 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 FAM43BQ6ZT52 329 aaPredicted RBP14.18□□□□□ -0.14
USE1-209ENST00000601592 ECHDC2Q86YB7 292 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 DEPTORQ8TB45 409 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 SP7Q8TDD2 431 aaPredicted RBP14.18□□□□□ -0.14
USE1-209ENST00000601592 GDPD5Q8WTR4 605 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
USE1-209ENST00000601592 KIFAP3Q92845 792 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms