RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 MTA3Q9BTC8 594 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 VPS37BQ9H9H4 285 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 RGPD2P0DJD1 1756 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 ADCY8P40145 1251 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 COASYQ13057 564 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 NNTQ13423 1086 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 SLFN12LQ6IEE8 588 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 RSRC2Q7L4I2 434 aaKnown RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 KIF9Q9HAQ2 790 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 UBE2TQ9NPD8 197 aaPredicted RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 PIN4Q9Y237 131 aaKnown RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 HERVK_113P62684 666 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 ADAMTS1Q9UHI8 967 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 ATP11BQ9Y2G3 1177 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 CXCL11O14625 94 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 PSMC4P43686 418 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 NR1I3Q14994 352 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 ATP8A1Q9Y2Q0 1164 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 APOBEC3HQ6NTF7 200 aaKnown RBP11.93□□□□□ -0.5
ZNF558-207ENST00000601372 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
ZNF558-207ENST00000601372 KRT81Q14533 505 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 SCFD2Q8WU76 684 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 NT5C1BQ96P26 610 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 TOPORSQ9NS56 1045 aaPredicted RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 A0A1B0GTH6 734 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 STK10O94804 968 aaKnown RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 CD58P19256 250 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 FBXO16Q8IX29 292 aaPredicted RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 HAUS2Q9NVX0 235 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 PPATQ06203 517 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 SURF1Q15526 300 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 IER5Q5VY09 327 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 NEK9Q8TD19 979 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 EHD4Q9H223 541 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 MFAP3P55082 362 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 RAD9BQ6WBX8 426 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 CCDC13Q8IYE1 715 aa11.92□□□□□ -0.5
ZNF558-207ENST00000601372 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
ZNF558-207ENST00000601372 TRIP13Q15645 432 aaPredicted RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ADAM21Q9UKJ8 722 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 KRT15P19012 456 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ZNF131P52739 623 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 PSMD2Q13200 908 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 NAA25Q14CX7 972 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 MYPNQ86TC9 1320 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 TADA3O75528 432 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SLCO1A2P46721 670 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 LRRC63Q05C16 580 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 IFT88Q13099 833 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ALCAMQ13740 583 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 OR6B3Q8NGW1 331 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ANAPC4Q9UJX5 808 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ESYT3A0FGR9 886 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 FERP16591 822 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 PLTPP55058 493 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SFR1Q86XK3 245 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 RNF149Q8NC42 400 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 AGPAT5Q9NUQ2 364 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 C17orf102A2RUQ5 167 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 DCDC2CA8MYV0 355 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 CTIFO43310 598 aaKnown RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 MS4A14Q96JA4 679 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 HEXIM2Q96MH2 286 aaKnown RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 SH2D3AQ9BRG2 576 aa11.91□□□□□ -0.5
ZNF558-207ENST00000601372 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
ZNF558-207ENST00000601372 ZNF233A6NK53 670 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 IFNAR2P48551 515 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 ATP11AP98196 1134 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 PPIL2Q13356 520 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 CYP4F22Q6NT55 531 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 SMARCAL1Q9NZC9 954 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 GPC3P51654 580 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms