RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 EVPLQ92817 2033 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 MEIS1O00470 390 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 EIF4BP23588 611 aaKnown RBP11.28□□□□□ -0.6
HIF3A-219ENST00000600879 ADCY7P51828 1080 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 PLA2G4DQ86XP0 818 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-219ENST00000600879 RUBCNQ92622 972 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 VN1R3Q9BXE9 311 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 FOXQ1Q9C009 403 aa11.28□□□□□ -0.6
HIF3A-219ENST00000600879 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 FAM86B1E9PN63 330 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 DHX15O43143 795 aaKnown RBP11.27□□□□□ -0.61
HIF3A-219ENST00000600879 B4GALT3O60512 393 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 CTSAP10619 480 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 GLULP15104 373 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 CHMLP26374 656 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 KLRC2P26717 231 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 GBP2P32456 591 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-219ENST00000600879 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.61
HIF3A-219ENST00000600879 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 IGSF21Q96ID5 467 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.61
HIF3A-219ENST00000600879 SFXN1Q9H9B4 322 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 RIC8AQ9NPQ8 531 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 GABBR1Q9UBS5 961 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 DNAJB4Q9UDY4 337 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 TCEAL9Q9UHQ7 104 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
HIF3A-219ENST00000600879 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.61
HIF3A-219ENST00000600879 CEP250Q9BV73 2442 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 SMCO2A6NFE2 343 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
HIF3A-219ENST00000600879 C2CD2LO14523 706 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 CALM1P0DP23 149 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 CALM2P0DP24 149 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 CALM3P0DP25 149 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 SREBF1P36956 1147 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 GPC3P51654 580 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
HIF3A-219ENST00000600879 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 TTC22Q5TAA0 569 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 FAM43BQ6ZT52 329 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-219ENST00000600879 DDX53Q86TM3 631 aaKnown RBP11.26□□□□□ -0.61
HIF3A-219ENST00000600879 SLC44A3Q8N4M1 653 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 MYADMQ96S97 322 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 ZNF577Q9BSK1 485 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 NRDE2Q9H7Z3 1164 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-219ENST00000600879 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
HIF3A-219ENST00000600879 GPR179Q6PRD1 2367 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 PSAPP07602 524 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 GALTP07902 379 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 CNPP09543 421 aaKnown RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SPATA31D3P0C874 917 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 DARSP14868 501 aaKnown RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 TMOD1P28289 359 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 MCM5P33992 734 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SLC11A1P49279 550 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 CLCN4P51793 760 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 POLGP54098 1239 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 TBC1D8BQ0IIM8 1120 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 DRP2Q13474 957 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SPATA31D4Q6ZUB0 917 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 MAML2Q8IZL2 1156 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-219ENST00000600879 LINC01465Q8N7H1 131 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 TMEM87BQ96K49 555 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 KLHL5Q96PQ7 755 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 DLGAP2Q9P1A6 1054 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 CEP131Q9UPN4 1083 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SIT1Q9Y3P8 196 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
HIF3A-219ENST00000600879 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 CACNA1GO43497 2377 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 IGLV3-22A0A075B6J6 115 aa11.24□□□□□ -0.61
HIF3A-219ENST00000600879 MAGEB2O15479 319 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms