RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 NLRP4Q96MN2 994 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 CASD1Q96PB1 797 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 LXNQ9BS40 222 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 INO80BQ9C086 356 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 A0A0U1RQF3 1178 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 WNT7AO00755 349 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZBTB39O15060 712 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 LINC01565O15544 149 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 HOXA2O43364 376 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 FGF18O76093 207 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 SLITRK3O94933 977 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 POLGP54098 1239 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 DLX2Q07687 328 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 SPIRE1Q08AE8 756 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 CLUL1Q15846 466 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 CALCRLQ16602 461 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 XKR9Q5GH70 373 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 LRRC55Q6ZSA7 311 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZNF410Q86VK4 478 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 TPH2Q8IWU9 490 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 THNSL1Q8IYQ7 743 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 MICAL1Q8TDZ2 1067 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 PPP2R3CQ969Q6 453 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZSCAN31Q96LW9 406 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 EIF2AK1Q9BQI3 630 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 CD320Q9NPF0 282 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 PCDHGC5Q9Y5F6 944 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
SOX2-OT-233ENST00000600778 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 PLXNA4Q9HCM2 1894 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 NEMFO60524 1076 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 EOMESO95936 686 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 LAG3P18627 525 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 SFPQP23246 707 aaKnown RBP eCLIP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 TXKP42681 527 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 NRIP1P48552 1158 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 UBE3AQ05086 875 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 ADAM15Q13444 863 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 CLLU1OSQ5K130 101 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 CATSPER4Q7RTX7 472 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 FAM178BQ8IXR5 827 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 HELQQ8TDG4 1101 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 DHX33Q9H6R0 707 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 PIN4Q9Y237 131 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
SOX2-OT-233ENST00000600778 ST18O60284 1047 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 ATF7P17544 494 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 PBX3P40426 434 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 RFC5P40937 340 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 PHKA2P46019 1235 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 NDUFV1P49821 464 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 ERVFC1P60507 584 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 CSPP1Q1MSJ5 1256 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 LONRF3Q496Y0 759 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 TWF2Q6IBS0 349 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 GJD3Q8N144 294 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 TCP11Q8WWU5 503 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 PSPC1Q8WXF1 523 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 C8orf76Q96K31 380 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 IFT122Q9HBG6 1241 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 TLR9Q9NR96 1032 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 FAM50BQ9Y247 325 aa12.93□□□□□ -0.34
SOX2-OT-233ENST00000600778 PER2O15055 1255 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 TBX10O75333 385 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 MCM7P33993 719 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 EMC2Q15006 297 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 KCNT2Q6UVM3 1135 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 MRPS27Q92552 414 aaKnown RBP12.92□□□□□ -0.34
SOX2-OT-233ENST00000600778 LPPQ93052 612 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms