RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 KLRC2P26717 231 aa20.1■□□□□ 0.81
SSBP4-207ENST00000600244 NETO1Q8TDF5 533 aa20.1■□□□□ 0.81
SSBP4-207ENST00000600244 BCO2Q9BYV7 579 aa20.1■□□□□ 0.81
SSBP4-207ENST00000600244 NFASCO94856 1347 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 CCDC195A0A1B0GUA6 201 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 KANSL1LA0AUZ9 987 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 CARNS1A5YM72 827 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 VTNP04004 478 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 GALTP07902 379 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 LAMP2P13473 410 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 MFAP1P55081 439 aaKnown RBP20.09■□□□□ 0.81
SSBP4-207ENST00000600244 DMWDQ09019 674 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 HTR4Q13639 388 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 ZNF484Q5JVG2 852 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 EMILIN2Q9BXX0 1053 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 CNNM2Q9H8M5 875 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 KCNH7Q9NS40 1196 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 ANGPTL2Q9UKU9 493 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 PATJQ8NI35 1801 aa20.09■□□□□ 0.81
SSBP4-207ENST00000600244 ZFYVE26Q68DK2 2539 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 ZC3H11AO75152 810 aaKnown RBP eCLIP20.08■□□□□ 0.81
SSBP4-207ENST00000600244 PAPLNO95428 1278 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 C22orf31O95567 290 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 PMLP29590 882 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 TROAPQ12815 778 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 CYB5R4Q7L1T6 521 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 OSBPL6Q9BZF3 934 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 NRDE2Q9H7Z3 1164 aa20.08■□□□□ 0.81
SSBP4-207ENST00000600244 MTF2Q9Y483 593 aaPredicted RBP20.08■□□□□ 0.81
SSBP4-207ENST00000600244 CNOT1A5YKK6 2376 aaKnown RBP20.08■□□□□ 0.8
SSBP4-207ENST00000600244 MIA3Q5JRA6 1907 aa20.08■□□□□ 0.8
SSBP4-207ENST00000600244 PDE1AP54750 535 aa20.07■□□□□ 0.8
SSBP4-207ENST00000600244 COL26A1Q96A83 441 aa20.07■□□□□ 0.8
SSBP4-207ENST00000600244 ADAMTS10Q9H324 1103 aa20.07■□□□□ 0.8
SSBP4-207ENST00000600244 MAN1C1Q9NR34 630 aa20.07■□□□□ 0.8
SSBP4-207ENST00000600244 GMEB2Q9UKD1 530 aa20.07■□□□□ 0.8
SSBP4-207ENST00000600244 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.07■□□□□ 0.8
SSBP4-207ENST00000600244 ATP4AP20648 1035 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 EIF4BP23588 611 aaKnown RBP20.06■□□□□ 0.8
SSBP4-207ENST00000600244 GPC5P78333 572 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 SHC2P98077 582 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 ABHD15Q6UXT9 468 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
SSBP4-207ENST00000600244 RSPH1Q8WYR4 309 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 SDF4Q9BRK5 362 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSBP4-207ENST00000600244 NUMBLQ9Y6R0 609 aa20.06■□□□□ 0.8
SSBP4-207ENST00000600244 MAGEA9P43362 315 aa20.05■□□□□ 0.8
SSBP4-207ENST00000600244 NLRP11P59045 1033 aaKnown RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 SPEM2Q0P670 501 aa20.05■□□□□ 0.8
SSBP4-207ENST00000600244 ITGB3BPQ13352 177 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 IMMTQ16891 758 aaKnown RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 ZNF707Q96C28 371 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 MXRA8Q9BRK3 442 aa20.05■□□□□ 0.8
SSBP4-207ENST00000600244 RPP25Q9BUL9 199 aaKnown RBP20.05■□□□□ 0.8
SSBP4-207ENST00000600244 SENP2Q9HC62 589 aa20.05■□□□□ 0.8
SSBP4-207ENST00000600244 COL4A3Q01955 1670 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-207ENST00000600244 FAM170BA6NMN3 283 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 INPPL1O15357 1258 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 CCNE2O96020 404 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 SLC11A1P49279 550 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 PRKCQQ04759 706 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 CCDC60Q8IWA6 550 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-207ENST00000600244 SMG7Q92540 1137 aaKnown RBP20.04■□□□□ 0.8
SSBP4-207ENST00000600244 PSTPIP2Q9H939 334 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 TBC1D13Q9NVG8 400 aa20.04■□□□□ 0.8
SSBP4-207ENST00000600244 CEP295Q9C0D2 2601 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 RFPL2O75678 378 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 MLF2Q15773 248 aaPredicted RBP20.03■□□□□ 0.8
SSBP4-207ENST00000600244 TSSK4Q6SA08 328 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 METTL13Q8N6R0 699 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 LINC01465Q8N7H1 131 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 ST13P5Q8NFI4 369 aaPredicted RBP20.03■□□□□ 0.8
SSBP4-207ENST00000600244 CLDN23Q96B33 292 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 SPZ1Q9BXG8 430 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 DNAJB4Q9UDY4 337 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 STK39Q9UEW8 545 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 PCDHA6Q9UN73 950 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 PCDHA8Q9Y5H6 950 aa20.03■□□□□ 0.8
SSBP4-207ENST00000600244 FRYQ5TBA9 3013 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 B4GALT3O60512 393 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 LRP3O75074 770 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 SSBP05455 408 aaKnown RBP eCLIP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 PROS1P07225 676 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 SDSP20132 328 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 NUCB1Q02818 461 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 UBXN2BQ14CS0 331 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 UBE2SQ16763 222 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 SLC44A4Q53GD3 710 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 FAM160B1Q5W0V3 765 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 PDXDC2PQ6P474 469 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 RSPO2Q6UXX9 243 aaPredicted RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 ZNF710Q8N1W2 664 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 RRP36Q96EU6 259 aaKnown RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 DSCC1Q9BVC3 393 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 TRAIPQ9BWF2 469 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms