RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SELPP16109 830 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 GLRA2P23416 452 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 AXLP30530 894 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 AFMP43652 599 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 PHKA2P46019 1235 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 GPC3P51654 580 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 ASIC1P78348 528 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 LRRC26Q2I0M4 334 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 CDCA2Q69YH5 1023 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 ZBTB8OSQ8IWT0 167 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 TMEM143Q96AN5 459 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 ANP32EQ9BTT0 268 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 POLR3FQ9H1D9 316 aaPredicted RBP13.57□□□□□ -0.24
TGFB1-204ENST00000600196 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 ARHGAP28Q9P2N2 729 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
TGFB1-204ENST00000600196 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 KLRC4O43908 158 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 TIMP1P01033 207 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 NPTX2P47972 431 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 CLCN3P51790 818 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 NCKAP1LP55160 1127 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 ZNF200P98182 395 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 GTF2BQ00403 316 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 MGAT3Q09327 533 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 CUL4BQ13620 913 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 RUFY4Q6ZNE9 571 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 LRRC71Q8N4P6 559 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 DEPTORQ8TB45 409 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 DHX38Q92620 1227 aaKnown RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 STRA6Q9BX79 667 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 TMEM206Q9H813 350 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 CHST12Q9NRB3 414 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
TGFB1-204ENST00000600196 PRKAG2Q9UGJ0 569 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 ATP11BQ9Y2G3 1177 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 PCDHA5Q9Y5H7 936 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 UBE4BO95155 1302 aa13.56□□□□□ -0.24
TGFB1-204ENST00000600196 GPR182O15218 404 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 IDEP14735 1019 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 DARSP14868 501 aaKnown RBP13.55□□□□□ -0.24
TGFB1-204ENST00000600196 THPOP40225 353 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 PEX3P56589 373 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 NLRP11P59045 1033 aaKnown RBP13.55□□□□□ -0.24
TGFB1-204ENST00000600196 COASYQ13057 564 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
TGFB1-204ENST00000600196 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 RHPN2Q8IUC4 686 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 RPUSD2Q8IZ73 545 aaKnown RBP13.55□□□□□ -0.24
TGFB1-204ENST00000600196 RNF149Q8NC42 400 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 APBB2Q92870 758 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 FIZ1Q96SL8 496 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 HIPK3Q9H422 1215 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 FZD8Q9H461 694 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 IFT122Q9HBG6 1241 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 PRMT7Q9NVM4 692 aaPredicted RBP13.55□□□□□ -0.24
TGFB1-204ENST00000600196 EXOC7Q9UPT5 735 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
TGFB1-204ENST00000600196 K7ERI5 159 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 ACKR2O00590 384 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 PPP1R37O75864 691 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 CHRNA1P02708 482 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 CXCL10P02778 98 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 SFPQP23246 707 aaKnown RBP eCLIP13.54□□□□□ -0.24
TGFB1-204ENST00000600196 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
TGFB1-204ENST00000600196 CAPSQ13938 189 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 MAPK6Q16659 721 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 BMT2Q1RMZ1 405 aa13.54□□□□□ -0.24
TGFB1-204ENST00000600196 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms