RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 FSD2A1L4K1 749 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.065e-8■■■■□ 20.6
IRF3-222ENST00000599144 TDP2O95551 362 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 EPCAMP16422 314 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 AKAP17AQ02040 695 aaKnown RBP21.66■■□□□ 1.06
IRF3-222ENST00000599144 TARBP2Q15633 366 aaKnown RBP21.66■■□□□ 1.06
IRF3-222ENST00000599144 FAM43BQ6ZT52 329 aaPredicted RBP21.66■■□□□ 1.06
IRF3-222ENST00000599144 KSR1Q8IVT5 923 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 ATOH1Q92858 354 aaPredicted RBP21.66■■□□□ 1.06
IRF3-222ENST00000599144 FDXACB1Q9BRP7 624 aaPredicted RBP21.66■■□□□ 1.06
IRF3-222ENST00000599144 TEKT3Q9BXF9 490 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 ADAM7Q9H2U9 754 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 INPP5FQ9Y2H2 1132 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 EVPLQ92817 2033 aa21.66■■□□□ 1.06
IRF3-222ENST00000599144 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.65■■□□□ 1.06
IRF3-222ENST00000599144 B4GALT3O60512 393 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 STBD1O95210 358 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
IRF3-222ENST00000599144 HOXB8P17481 243 aaPredicted RBP21.65■■□□□ 1.06
IRF3-222ENST00000599144 BLOC1S2Q6QNY1 142 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 VPS52Q8N1B4 723 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 RIPOR3Q96MK2 946 aa21.65■■□□□ 1.06
IRF3-222ENST00000599144 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 MCTP2Q6DN12 878 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 TBCKQ8TEA7 893 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 TMEM169Q96HH4 297 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 CEP89Q96ST8 783 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 RIT2Q99578 217 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 LARP6Q9BRS8 491 aaKnown RBP21.64■■□□□ 1.05
IRF3-222ENST00000599144 GBP3Q9H0R5 595 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 ZBP1Q9H171 429 aa21.64■■□□□ 1.05
IRF3-222ENST00000599144 NID2Q14112 1375 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 KMT2EQ8IZD2 1858 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 GFRA3O60609 400 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 EOMESO95936 686 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 RPS6KB1P23443 525 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 PHKA2P46019 1235 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 ALDH7A1P49419 539 aaKnown RBP21.63■■□□□ 1.05
IRF3-222ENST00000599144 JAK3P52333 1124 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 NLRP5P59047 1200 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 PLA2G4FQ68DD2 849 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 TWF2Q6IBS0 349 aaKnown RBP21.63■■□□□ 1.05
IRF3-222ENST00000599144 CES5AQ6NT32 575 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 BICD2Q8TD16 824 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 KCNB2Q92953 911 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 PRRX2Q99811 253 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 GCOM2Q9BZD3 368 aaPredicted RBP21.63■■□□□ 1.05
IRF3-222ENST00000599144 NRDE2Q9H7Z3 1164 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 DNAJB4Q9UDY4 337 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 PIN4Q9Y237 131 aaKnown RBP21.63■■□□□ 1.05
IRF3-222ENST00000599144 NR2E1Q9Y466 385 aa21.63■■□□□ 1.05
IRF3-222ENST00000599144 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 DTNBO60941 627 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 PSMD10O75832 226 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 SFNP31947 248 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 RHPN2Q8IUC4 686 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 TMEM105Q8N8V8 129 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 CCDC148Q8NFR7 591 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 NLRP4Q96MN2 994 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 VN1R3Q9BXE9 311 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
IRF3-222ENST00000599144 MRPL9Q9BYD2 267 aaKnown RBP21.62■■□□□ 1.05
IRF3-222ENST00000599144 TBC1D13Q9NVG8 400 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 SUCLA2Q9P2R7 463 aaPredicted RBP21.62■■□□□ 1.05
IRF3-222ENST00000599144 LIMD1Q9UGP4 676 aa21.62■■□□□ 1.05
IRF3-222ENST00000599144 SSBP05455 408 aaKnown RBP eCLIP21.61■■□□□ 1.05
IRF3-222ENST00000599144 IFNAR1P17181 557 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
IRF3-222ENST00000599144 HSPA4P34932 840 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 SLC11A1P49279 550 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 ITIH3Q06033 890 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 MTMR3Q13615 1198 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 XKR3Q5GH77 459 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 TMC5Q6UXY8 1006 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 ZNF280BQ86YH2 543 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 AIFM3Q96NN9 605 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 NIFKQ9BYG3 293 aaKnown RBP21.61■■□□□ 1.05
IRF3-222ENST00000599144 BMP2KQ9NSY1 1161 aaPredicted RBP21.61■■□□□ 1.05
IRF3-222ENST00000599144 DACT1Q9NYF0 836 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 SORCS3Q9UPU3 1222 aa21.61■■□□□ 1.05
IRF3-222ENST00000599144 ZDBF2Q9HCK1 2354 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 GALTP07902 379 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 USP11P51784 963 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 AFF1P51825 1210 aaKnown RBP21.6■■□□□ 1.05
IRF3-222ENST00000599144 ZNF579Q8NAF0 562 aaKnown RBP21.6■■□□□ 1.05
IRF3-222ENST00000599144 TMEM87AQ8NBN3 555 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 SLC22A17Q8WUG5 538 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 IGSF21Q96ID5 467 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 NECTIN4Q96NY8 510 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 FAM105AQ9NUU6 356 aa21.6■■□□□ 1.05
IRF3-222ENST00000599144 IGKV6-21A0A0C4DH24 114 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 ST18O60284 1047 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 OFD1O75665 1012 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 MYBP10242 640 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 SFPQP23246 707 aaKnown RBP eCLIP21.59■■□□□ 1.05
IRF3-222ENST00000599144 MTHFRP42898 656 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 NPEPPSP55786 919 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 Q4G0T1 1027 aa21.59■■□□□ 1.05
IRF3-222ENST00000599144 NOMO2Q5JPE7 1267 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms